KEGG   Xenopus tropicalis (tropical clawed frog): 549352
Entry
549352            CDS       T01011                                 
Symbol
snrpc
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
  KO
K11095  U1 small nuclear ribonucleoprotein C
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    549352 (snrpc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    549352 (snrpc)
Spliceosome [BR:xtr03041]
 Complex A
  U1 snRNP components
   U1 snRNP specific factors
    549352 (snrpc)
 Complex B
    549352 (snrpc)
SSDB
Motif
Pfam: zf-U1
Other DBs
NCBI-GeneID: 549352
NCBI-ProteinID: NP_001016598
Xenbase: XB-GENE-495092
UniProt: B0JYS7
Position
2:complement(69114918..69135389)
AA seq 159 aa
MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQG
KIPPTPFAAPPAGSAMIPPPPSMGGPPRPGMMPAPPMAGPPMMPMMGPPPPGMMPVGHGP
GMRPPMGAHMPMMPGPPMMRPPTRPMMLQSRPGMARPDR
NT seq 480 nt   +upstreamnt  +downstreamnt
atgccgaagttttattgcgactactgcgatacgtatctcacccatgattcgccttcagtc
cgtaagactcactgtagtgggaggaagcacaaggagaatgtaaaagattattatcagaag
tggatggaagagcaggcacagagcctaattgacaaaaccactgctgcatttcaacaagga
aagatacccccaacaccttttgcggctccgccagctggaagtgccatgatcccaccacct
ccaagcatgggtgggcctcctcgacctggaatgatgcctgctccccccatggctggccct
cctatgatgccgatgatgggaccacctcctccaggaatgatgccagtgggccatggtcct
ggtatgagaccacccatgggagctcacatgcctatgatgcctggcccacccatgatgcgt
ccaccgacacgccctatgatgctacagtcccggcctggcatggcacgccctgaccgatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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