KEGG   Xenopus tropicalis (tropical clawed frog): 549400
Entry
549400            CDS       T01011                                 
Symbol
txnl4a
Name
(RefSeq) thioredoxin-like protein 4A
  KO
K12859  U5 snRNP protein, DIM1 family
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    549400 (txnl4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    549400 (txnl4a)
Spliceosome [BR:xtr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    549400 (txnl4a)
SSDB
Motif
Pfam: DIM1 Thioredoxin Thioredoxin_8 Thioredoxin_7
Other DBs
NCBI-GeneID: 549400
NCBI-ProteinID: NP_001016646
Xenbase: XB-GENE-1004157
UniProt: Q28IH4
Position
6:96973962..96980756
AA seq 142 aa
MSYMLPHLHNGWQVDQAILSEEDRVLVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIVETVY
RGARKGRGLVVSPKDYSTKYRY
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtcgtacatgcttcctcatttgcacaatggctggcaggtcgaccaggcaatcttgtct
gaggaagacagagttttagttatacgttttggccatgactgggatccaacttgtatgaag
atggatgaagttttgtacagtatagctgaaaaggttaaaaactttgctgttatttatctt
gtggatatcacagaagttccagacttcaacaagatgtatgagttgtatgacccttgtaca
gtgatgtttttcttcagaaataagcacatcatgattgatttgggcactggaaacaacaac
aagataaactgggcaatggaagacaagcaagaaatgattgatattgtagaaacagtttac
aggggagcacgaaaaggcagaggtctggtagtatctccaaaggactattctaccaagtac
agatactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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