KEGG   Xenopus tropicalis (tropical clawed frog): 549418
Entry
549418            CDS       T01011                                 
Symbol
b4galt1.2
Name
(RefSeq) beta-1,4-galactosyltransferase 1
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00052  Galactose metabolism
xtr00510  N-Glycan biosynthesis
xtr00513  Various types of N-glycan biosynthesis
xtr00514  Other types of O-glycan biosynthesis
xtr00515  Mannose type O-glycan biosynthesis
xtr00533  Glycosaminoglycan biosynthesis - keratan sulfate
xtr00601  Glycosphingolipid biosynthesis - lacto and neolacto series
xtr01100  Metabolic pathways
Module
xtr_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
xtr_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    549418 (b4galt1.2)
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    549418 (b4galt1.2)
   00513 Various types of N-glycan biosynthesis
    549418 (b4galt1.2)
   00515 Mannose type O-glycan biosynthesis
    549418 (b4galt1.2)
   00514 Other types of O-glycan biosynthesis
    549418 (b4galt1.2)
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    549418 (b4galt1.2)
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    549418 (b4galt1.2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:xtr01003]
    549418 (b4galt1.2)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    549418 (b4galt1.2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    549418 (b4galt1.2)
Enzymes [BR:xtr01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     549418 (b4galt1.2)
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     549418 (b4galt1.2)
    2.4.1.90  N-acetyllactosamine synthase
     549418 (b4galt1.2)
Glycosyltransferases [BR:xtr01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   549418 (b4galt1.2)
Membrane trafficking [BR:xtr04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    549418 (b4galt1.2)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   549418 (b4galt1.2)
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Glyco_tranf_2_2
Other DBs
NCBI-GeneID: 549418
NCBI-ProteinID: NP_001016664
Xenbase: XB-GENE-1015082
UniProt: Q28IP2
Position
1:complement(94302272..94371650)
AA seq 362 aa
MKEPQLPVSNLTAALPGASLQKACKFVVVFCSLHFCVVLIYYLSGADFGILQFFRQNQQS
QLAYKQNYTISNATMRAISTKGRTKEPKEKLRNCPETSTLLVGPLQIVFSMHVDLEDIRK
SNPDVIEGGHYRPKDCNALQKVAIIIPFRNRDEHLKYWLYYMHPILKRQQLDYGVYVINQ
DGDKTFNRAKLLNIGYVESLKDYAYDCFVFSDVDLIPMDDRNTYRCFNQPRHLSAAMDKF
GFGLPYNQFFGGVSALSKEQFLKINGFPNNYWGWGGEDDDIYNRIASRGMYISRPDTLIG
RCRMIRHNRDDKNDPNPKRFDLLAHTRQTMDSDGINTLSYKVVSTTRFPLYTYITVDIGL
PH
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaaagagccgcagttacctgtgtctaacttgactgccgccctgcccggtgcgtctcta
cagaaagcctgtaagttcgtggtggtcttctgctcccttcatttctgcgttgtccttatc
tactacttgtccggtgccgatttcggcatccttcagttctttaggcaaaaccaacagtcc
cagctggcatacaaacagaattacactattagcaacgccacgatgcgggcgatcagtacc
aaaggaagaactaaggaaccaaaagaaaaactaaggaactgtccggagacatctacctta
ctagttggtcctctacagattgtgttttccatgcacgtggatctggaagatataagaaaa
tctaacccagatgtaatagaaggagggcactatagaccaaaagactgtaatgcattgcag
aaagtggccatcatcataccttttagaaatcgtgatgaacaccttaagtactggctgtat
tatatgcatccaattctcaagagacagcagcttgattatggggtgtatgttatcaatcaa
gatggtgacaaaactttcaatcgggccaaactgctaaacattggttatgtggaatctttg
aaagactatgcctatgattgttttgtatttagtgatgttgatcttatcccaatggacgat
cgaaacacttacaggtgttttaaccaaccaaggcatctctctgctgcaatggataagttt
gggtttggcctaccatacaatcagttttttggtggtgtttctgcattgagcaaggagcaa
tttctcaaaattaatggatttccaaacaattattggggttggggtggagaagatgatgat
atctacaaccgaattgcatcaagaggtatgtatatatctcggccagatactcttattgga
agatgccggatgattcgtcataacagagatgacaaaaatgacccgaatccgaaaaggttt
gacttgcttgctcatacaagacagactatggattcagatgggataaacacactctcttat
aaagttgtcagtacaacgcgatttcctctgtacacatatattacagtagatattggttta
ccccattaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (10)   
   KEGG PATHWAY (8)   
   KEGG MODULE (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (10)   
   KEGG ENZYME (3)   
   KEGG REACTION (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (47)   

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