KEGG   Xenopus tropicalis (tropical clawed frog): 549469
Entry
549469            CDS       T01011                                 
Symbol
cops4
Name
(RefSeq) COP9 signalosome complex subunit 4
  KO
K12178  COP9 signalosome complex subunit 4
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    549469 (cops4)
Ubiquitin system [BR:xtr04121]
 Deubiquitinating enzyme (DUB)
  UBL-specific proteases (ULPs)
   COP9 signalosome (CSN) complex
    549469 (cops4)
SSDB
Motif
Pfam: CSN4_RPN5_eIF3a PCI RPN7 TPR_7 DinB TPR_12
Other DBs
NCBI-GeneID: 549469
NCBI-ProteinID: NP_001016715
Xenbase: XB-GENE-967024
UniProt: Q28J21
Position
1:complement(83700711..83713316)
AA seq 406 aa
MAASVRQDLTQLMNSSGSHKDLAGKYRQILDKALQLPGPEQLEALKAFVEAMVNENVSLV
ISRQLLTDFCTHLPSLPDGIAKEIYHFTLEKIQPRVISFEEQVASVRQHLASIYEKEEDW
RNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTN
EQLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERMEALKHALHCTILASAGQ
QRSRMLATLFKDERCQQLSAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTGDGSSIL
DRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVH
FETREALPTWDKQIQSLCFQVNNLLEKISQTAPDWTAQAMEAQMAQ
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggcagcctctgtcagacaagaccttacacaactgatgaattctagcggatcgcataag
gatctcgccggaaagtaccgacaaatattagataaagcactccaacttcctggcccagaa
caacttgaagccttgaaagcttttgttgaagcaatggtaaatgaaaatgtcagtttggtg
atttcacgtcagctgctcactgatttctgtacccacctccccagcctgcctgatggcata
gctaaggaaatctaccacttcaccttggagaagatacaaccgagagtaatttcatttgaa
gaacaggttgcatcagtcagacagcatttggcatccatttatgagaaagaagaggactgg
agaaatgctgctcaggtgctagtggggatacctctagaaacaggtcaaaaacaatacaat
gtagactataaattagagacctacttgaaaattgcccgtctgtacttggaagatgacgat
cctgtacaggcagaagcctatattaacagggcatctcttttgcagaatgagtcaaccaat
gaacagcttcagatccattataaggtgtgctatgcccgtgtgcttgactacaggagaaaa
ttcatagaagctgctcagcgatacaatgagctgtcgtacaaaaccatagtgcatgaaagt
gagaggatggaggcattaaagcatgcactacactgcactatactagcttctgcaggtcaa
cagcgctctcgaatgctggctactttgtttaaggatgagcgatgccagcagctgtcggcc
tatggaatcctggaaaagatgtacctagacaggatcataaggggaaatcagcttcaggag
tttgctgctatgctcatgccacatcagaaagctacaactggagatggttctagtattttg
gacagagctgtgattgaacacaacttgttatcagcaagcaagctttacaataatattaca
tttgaggaacttggagctttgttagaaatcccagctgctaaggcagaaaaaatagcttct
cagatgattacagaaggacgaatgaatggattcattgaccagattgatgggatcgttcat
tttgaaacacgagaagcattaccaacatgggataagcagatacagtccttatgctttcaa
gttaataacctgttggaaaagatcagccagacagccccagactggacagcccaagcaatg
gaagctcaaatggcgcaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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