KEGG   Xenopus tropicalis (tropical clawed frog): 549524
Entry
549524            CDS       T01011                                 
Symbol
tom1
Name
(RefSeq) target of Myb protein 1
  KO
K26401  target of Myb membrane trafficking protein 1 and related proteins
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    549524 (tom1)
Membrane trafficking [BR:xtr04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    549524 (tom1)
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT associated proteins
    549524 (tom1)
SSDB
Motif
Pfam: VHS GAT BMFP Herpes_BBRF1
Other DBs
NCBI-GeneID: 549524
NCBI-ProteinID: NP_001016770
Xenbase: XB-GENE-5834946
UniProt: Q28D28
Position
4:complement(121994670..122051488)
AA seq 495 aa
MDFLLGNAFATPVGQRIEKATDGSLRSEDWGLNMEVCDIINETEDGPKDAIRALKKRIVG
NKNFREVMLALTLLETCVKNCGHRFHVLVGSQEFVEGVLVKTILPKNNPPAIVHDKVLIL
IQAWADAFRSSPDLTGVVSVYEDLRRKGLEFPMTDLDTLSPIHTPQPSFSAPESPSQQDC
PSSEFPQRGGSVHSEPPPYNVPATASGDTAVTPTPDQLAKLHSELEIVNGNAKVMSEMLT
ELVPQTAKQSDVELLQELNRTCRAMQQRVLELIPRVTHEQLTEELLIVNDNLNNVFIRHE
RFERMLAGQQGPVAEAQVARDRVLPPSLIDLEETPSNSAPTLSTQLAGINLSSGSVSGTL
QSLGGTKKPDDDFDMFALTRGSSLADQRKSVKYEEPQATDGLAGALDTRQQNTGAIPAAQ
NNFMDDIEKWLSSDTGEEIEGEDGVTSEEFDKFLEERAKAADRIPSLSSPGTEPPRAAPS
TKRDKKEAEDALFAL
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggatttcctgctgggaaacgcgtttgcaaccccagtggggcagcgaatcgaaaaagcc
actgatggatcccttcgttcagaagactggggtcttaacatggaggtctgtgatattatc
aatgagacagaagatgggccaaaagatgcaatccgagcattaaagaagaggattgtgggt
aacaagaactttcgggaggtgatgctggcattaacgctcttggagacttgcgtgaaaaac
tgcggtcatcgattccacgttctagtaggtagccaagagtttgtggagggagttctggtg
aagacaattttacccaaaaacaaccctccagccatcgtccatgataaagttctaattcta
atacaggcctgggcagatgccttccgtagctctccagacctgactggggtggtcagtgta
tatgaagatttgaggaggaaaggcctggaatttccaatgactgatttggacactctgtct
cctatacacacaccgcaaccaagcttctctgcaccagaatccccttctcaacaggactgt
ccttcctcagagtttcctcagaggggagggtcagtacattctgagcctcccccatacaat
gttccagctacagcctctggcgacactgcagttacccccacacctgatcagttggcaaag
cttcacagcgagctggaaattgtgaatggtaacgcaaaggtgatgtcggagatgttgaca
gagctggtccctcagacagccaagcagtctgacgtggagctgttacaggaattgaatcgg
acgtgccgagcaatgcagcagcgagttttggagctaatcccccgtgtaacccatgaacag
ctgactgaagagctacttattgtgaatgataacctcaataatgtcttcattcgccatgaa
aggtttgagaggatgctcgctggtcagcaaggcccagtagcagaggcacaggttgcaaga
gacagggttcttcccccatctcttattgacctcgaggaaacgccctctaattcagctccg
actctttctacgcagttagcaggaatcaacttgtcctctgggtctgtgagtggaaccctg
cagtccctgggtggaaccaagaaaccagatgatgattttgatatgtttgcactgaccagg
ggaagctctttggcagaccagcgcaaaagtgtaaagtatgaggaaccgcaggctacagat
ggtcttgcaggggctctggatacccggcagcagaacactggagctattccagctgcccaa
aacaactttatggatgacattgagaagtggctgtcatcagatacgggtgaagagattgag
ggggaggatggtgtgaccagtgaagagtttgataagtttctggaggaacgagcaaaggca
gcagatcgcattccatcactgtcatcaccaggaacagagccccccagggcagcaccaagc
acaaagagagacaaaaaggaagcggaggatgccctttttgccttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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