KEGG   Xenopus tropicalis (tropical clawed frog): 549819
Entry
549819            CDS       T01011                                 
Symbol
polr2g
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03020  RNA polymerase
xtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    549819 (polr2g)
  09124 Replication and repair
   03420 Nucleotide excision repair
    549819 (polr2g)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    549819 (polr2g)
   03019 Messenger RNA biogenesis [BR:xtr03019]
    549819 (polr2g)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    549819 (polr2g)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     549819 (polr2g)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     549819 (polr2g)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      549819 (polr2g)
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 549819
NCBI-ProteinID: NP_001017065
Xenbase: XB-GENE-1006751
UniProt: Q28G24
Position
4:complement(34583215..34589442)
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTVDEDVVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttctaccatatctcattggaacatgaaattcttctgcaccctagatattttggccct
aaccttctcaacactgtcaaacagaaactcttcactgaggtagagggaacatgtactggc
aagtatggttttgtgattgcagtgaccacaatcgataacattggtgctggggtgattcag
ccagggagagggtttgtgctttatcccgtcaagtacaaggccattgtcttccgtcctttc
aagggtgaggtggtagatgccgtggtgacccaggttaataaggttggattattcactgaa
attggtccaatgtcctgcttcatatcaagacattcaatcccatctgagatggaatttgac
ccaaattccaatccaccatgttataagaccgtagatgaggatgttgtcattcaacaggat
gatgagatccggctcaaaattgttgggaccagagtggacaaaaatgacatatttgcgatt
ggctctctaatggatgattatcttggtctggtgagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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