KEGG   Xenopus tropicalis (tropical clawed frog): 594884
Entry
594884            CDS       T01011                                 
Symbol
grn
Name
(RefSeq) granulins precursor
  KO
K23879  progranulin
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    594884 (grn)
Membrane trafficking [BR:xtr04131]
 Endosome - Lysosome transport
  Others
   Others
    594884 (grn)
SSDB
Motif
Pfam: Granulin
Other DBs
NCBI-GeneID: 594884
NCBI-ProteinID: NP_001072169
Xenbase: XB-GENE-995710
UniProt: Q0IHZ2
Position
10:complement(15058239..15084929)
AA seq 1161 aa
MGPPWFLLLVVSTVSATLCPDGSTCGEKSLCCELPGKKGYGCCPAAEVVSRSLPMILSQT
SCSGCPDEYSCVNTPEGGTACCPLSEGKSCQDGHHCCSVGSYCSDDGHYCIPASNQSAVV
CPDGRSECPTLTTCCMMSDMSSWGCCPMPQAVCCDDHMHCCPHNSECDVQQGRCISNQDH
IPWMSKLPARVKSEGLKLVGLGDEERRVPCLDGTFCPDGSTCCEQVDHTYGCCSILSAVC
CSDHLHCCPGGTTCDLVHKKCVSQTGEGPLLPQMPAIREESANQVPCDATTSCPDKNTCC
HLSSEKWGCCPYAQAVCCDDHIHCCPSGFTCSGGSCVLAEHSIPWMRKTLAQGLKTTRVQ
CDDTASCPEKETCCRLVSGKWGCCPVVKAVCCNDHLHCCPEGYTCSQGECSKMEHSIPWF
TKTPALTHEARDVECDDMYSCPDGQTCCRLASGDWGCCPIAQAVCCDDHEHCCPPGYTCS
GGSCQKGELSIPWFLKTPALKQKARDVQCDDMYSCADGQTCCRLASGDWGCCPIAQAVCC
DDHEHCCPPGYTCSGGSCQQGVLSIPWFLKTPALKQNARDVQCDDMYSCADGQTCCRLAS
GDWGCCPIAQAVCCDDHEHCCPPGYTCSGGQCQKGEHSIPLFSKTPALKQKARDVQCDEI
YSCPDGQTCCRLASGDWGCCPIARAVCCDDHEHCCPHGYICSGGSCQQGELSIPWFLKTP
ALKQKARDVQCDDMYSCPDGQTCCRLASGDWGCCPIAQAVCCDDHEHCCPPGYTCSGGQC
QKGEHSIPLFSKTPALRQETKYVKCDDTHSCADGQTCCRLASGDWGCCPIAQAVCCDDHE
HCCPPGYTCSGSQCMIGEHSIPWFSKTPALKQKAKDVQCDDMYSCADGQTCCRLASGDWG
CCPIAQAVCCDDHEHCCPPGYTCSGGQCQKGEHSIPWYSKTPALKQEGNIVKCDDSFACK
DGYTCCRMVSGVWGCCPIEKAVCCSDHWHCCPQGFTCDARGTCVLGQFSIPWLTKVPALP
FDGTHSICDDTHTCPSGTTCCPGEGGGWRCCPVEEKEAIETSPSDTSVQGLRLDYVWCDS
QYACFDGQTCCRGLGGVWNCCVYTQGVCCPDMVHCCPYGYVCLNHGTSCSRSGSPRWDGQ
SGSPHWDGKQSPRDGKRPPFL
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgggtccaccttggtttcttctgcttgtggtctccactgttagtgccacactctgccca
gatggcagcacttgtggagaaaagagtctgtgctgtgaactgcctggcaagaaggggtat
ggctgttgccctgcggcagaggttgtgtctcgctcccttcctatgattctttcccagacc
tcctgctcaggctgccctgatgagtattcctgtgtgaatactccagaagggggaaccgct
tgctgtccattatctgagggaaaatcttgccaagatggacatcactgctgttctgtaggc
tcctactgctcagatgatggccactactgtatcccagcctctaaccagtctgctgtagtc
tgcccggatggaaggtctgaatgccccactctcaccacctgctgtatgatgtctgacatg
tcgtcatgggggtgctgccccatgccacaggcagtttgctgtgatgatcatatgcactgc
tgtccccataactctgagtgtgatgtccagcaagggcgctgtatctccaaccaggaccac
attccctggatgagcaaacttccagcccgtgtgaaatcagagggcttgaaattagttggc
ttgggagatgaagaacgacgggttccatgccttgatggcactttctgcccagatggctct
acctgctgtgaacaagtagaccacacatatgggtgctgctccatattgtctgctgtctgc
tgttctgaccatcttcactgttgccctggtggtaccacatgtgaccttgtccataagaaa
tgtgtatcccaaactggggagggccccttattgccacagatgccagctatccgggaggaa
tcagccaaccaggtcccctgcgatgccaccactagctgcccggataagaacacctgctgc
cacctgtcatctgagaagtggggttgctgcccttatgcacaggcagtgtgttgtgacgat
catatccactgctgtcccagtgggttcacatgttctggaggcagctgtgtgttggcagag
cactctatcccttggatgaggaagactttggctcaggggctgaaaactaccagagttcag
tgtgatgacaccgccagctgcccagaaaaggaaacctgctgtcgtctggtatctggcaag
tggggttgctgtcctgtagtgaaggctgtgtgctgtaatgatcatcttcattgctgtcct
gaaggttatacatgctcccagggcgaatgctcaaaaatggaacactccatcccttggttc
acaaaaactccagctctgacccatgaagccagagatgtcgaatgtgatgatatgtacagc
tgcccagatggacaaacctgctgccgcttggcctcaggcgactggggatgctgcccaata
gcacaggctgtgtgctgtgatgaccatgaacactgctgccctcctggttacacatgttct
ggaggaagttgccagaagggggagctctctatcccatggttcctcaagactccagctttg
aaacagaaggccagagatgtccagtgtgatgatatgtacagctgcgcagatgggcaaacc
tgctgccgcctggcatctggggactggggatgctgccctatagcacaggctgtgtgctgt
gatgaccatgaacactgctgccctcctggatacacatgctctggaggaagttgccagcag
ggggtgctttcaatcccatggttcctcaagactccagctttgaaacagaatgccagagat
gtccagtgtgatgatatgtatagctgcgcagatgggcaaacctgctgccgcctggcatct
ggggactggggatgctgccctattgcacaggctgtgtgctgtgatgaccatgagcactgc
tgccctcctggttacacatgctccggaggacagtgccagaagggggagcactccatccca
ttgttcagcaagactccagctttgaaacagaaggccagagatgtccagtgtgatgaaatt
tacagctgcccagatgggcaaacctgctgccgcttggcctctggcgactggggatgctgc
ccaatagcacgggctgtgtgctgtgatgaccatgaacactgctgccctcatggatacata
tgctctggaggaagttgccagcagggggagctctctatcccatggttcctcaagactcca
gctttgaaacagaaggccagagatgtccagtgtgatgatatgtacagttgcccagatgga
caaacctgctgccgcttggcctctggtgactggggatgctgcccaatagcacaggctgtg
tgctgtgatgaccatgaacactgctgccctcctggttacacctgctctggaggacagtgc
cagaagggggagcactccatcccattgttcagcaagactccagctctgagacaggagacc
aaatatgtcaaatgtgatgatacccacagctgtgcagatgggcaaacctgctgccgcctg
gcatctggggactggggatgctgccctatagcacaggctgtgtgctgtgatgaccatgaa
cactgctgcccccctggatatacctgctctgggtcacagtgcatgattggggagcactcc
atcccatggttcagcaagaccccggctttaaaacagaaggccaaagatgtccagtgtgat
gatatgtacagctgcgcagatgggcaaacctgctgccgcttggcatctggggactgggga
tgctgccctatagcacaggctgtgtgttgtgatgaccatgaacactgctgccctcctggt
tacacatgctctggaggacaatgccagaagggagagcactccatcccatggtacagcaag
actccagctctgaagcaagaaggtaacatagtgaaatgtgatgattccttcgcctgtaaa
gatggttacacttgttgtcgcatggtctctggggtgtggggatgctgccctatagagaag
gctgtgtgctgctccgaccactggcactgctgcccccaggggtttacctgtgatgccaga
ggtacctgtgtactaggccagttctctatcccatggctcactaaggttccagctttgccc
tttgatgggactcacagtatttgtgacgatacccacacttgcccttctggtaccacatgc
tgccctggagaggggggaggctggagatgctgcccagtggaagagaaggaggctatcgaa
acctcccccagtgacacctctgtccagggattacgtctggattatgtctggtgtgattct
cagtatgcctgctttgatggccaaacttgttgtcgaggactcggaggagtgtggaactgc
tgtgtttatactcagggggtgtgctgcccagacatggtgcactgctgtccctatgggtat
gtgtgtctgaaccatggaacgtcatgtagtcgttcaggaagcccacgttgggatggtcag
tcgggaagcccacattgggatggaaaacagtccccacgggatggtaaacggccccctttc
ctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (248)   
   KEGG ORTHOLOGY (1)   
   RefGene (243)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (261)   

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