KEGG   Xenopus tropicalis (tropical clawed frog): 595071
Entry
595071            CDS       T01011                                 
Symbol
rab13
Name
(RefSeq) ras-related protein Rab-13
  KO
K06109  Ras-related protein Rab-13
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04530  Tight junction
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    595071 (rab13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    595071 (rab13)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xtr04147]
    595071 (rab13)
   04031 GTP-binding proteins [BR:xtr04031]
    595071 (rab13)
Membrane trafficking [BR:xtr04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    595071 (rab13)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   595071 (rab13)
  Exosomal proteins of colorectal cancer cells
   595071 (rab13)
GTP-binding proteins [BR:xtr04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    595071 (rab13)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB RsgA_GTPase MMR_HSR1 AAA_7 PduV-EutP Septin AAA TniB AAA_16 AAA_22
Other DBs
NCBI-GeneID: 595071
NCBI-ProteinID: NP_001025679
Xenbase: XB-GENE-6070728
UniProt: Q561P0
Position
8:143551968..143562253
AA seq 201 aa
MAKAYDHLFKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQ
VWDTAGQERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENAAAGVERMLLG
NKCDMENKRKVPKERGEKLAKEHGIRFFETSAKSSQNVDEAFNTLARDILMKISKRSAPG
VKDPLDLKSSSKKGSNKCSVL
NT seq 606 nt   +upstreamnt  +downstreamnt
atggcgaaagcctacgatcatctcttcaagctgctgctgatcggggacagcggggtgggc
aagacgtgcctcattgtgcgcttctcggaggacagcttcaacagcacgtacatctctact
ataggtattgactttaaaatcagaaccacagagatcgaggggaagaaaataaaactccag
gtctgggacacagcagggcaggagaggtttaaaacaatcacaacggcctattaccggggg
gccatggggattattctggtctatgatatcacagacgagcgatcctatgagaatatccag
aactggatgaagagtattaaagagaacgcggcggccggggtggagcggatgctgctgggt
aataagtgcgacatggagaacaagcggaaagtcccgaaggagcgaggagagaagctcgcc
aaggaacatggcatccgattctttgagacaagtgccaagtccagtcagaatgtagatgag
gcatttaatacactggccagagatattctaatgaagatctccaagagatcagcgccggga
gttaaggacccgctggatctgaaaagctcatcgaagaaaggaagcaacaagtgttcggtg
ctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (31)   

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