KEGG   Xenopus tropicalis (tropical clawed frog): 613098
Entry
613098            CDS       T01011                                 
Symbol
mmp13
Name
(RefSeq) matrix metallopeptidase 13 (collagenase 3) precursor
  KO
K07994  matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:xtr01002]
    613098 (mmp13)
Peptidases and inhibitors [BR:xtr01002]
 Metallo peptidases
  Family M10
   613098 (mmp13)
SSDB
Motif
Pfam: Peptidase_M10 PG_binding_1 Reprolysin_3 Reprolysin_5 Reprolysin_4 DUF4953 Metallopep
Other DBs
NCBI-GeneID: 613098
NCBI-ProteinID: NP_001027506
Xenbase: XB-GENE-481559
UniProt: Q4QQQ9
Position
2:161873203..161880351
AA seq 261 aa
MLQAIVFAILALSCIHAMPAPITDNNISPSDRQFAEGYLDKYYLMTAKSKNTFAEKIKEM
QKFFGMSVTGRLDSDTMAMMKTPRCGMPDVAEFRQFPGRQRWTKTQLTYRIVNYTPDLPR
SMVDEAIRLAFKVWSDVTPLKFTRISSRRADIMIQFGARSHGDFIPFDGPNGVLAHAFAP
GSGIGGDAHFDEDERWTSTSAGFNLFLVAAHEFGHSLGLDHSRDPRALMFPSYRYMNTRN
FRLPQDDVNGIQSIYGRKTGK
NT seq 786 nt   +upstreamnt  +downstreamnt
atgctacaggcaatcgtttttgctatcttggccctgtcctgtatccacgctatgccagca
cctatcactgacaataatatcagtccatcggaccgtcagtttgccgagggttacttggac
aaatactacttgatgacagcaaaatcaaagaacacctttgcggaaaaaatcaaagagatg
caaaagttctttgggatgtcggtgacagggaggttggactcggacaccatggcaatgatg
aagaccccccggtgcggaatgcccgatgttgcagagttcagacagttccctgggaggcag
agatggacaaaaacccagctgacatacagaattgtaaattacactcctgaccttcctcgc
tcaatggtagatgaagcaatacggttggcatttaaagtgtggagtgatgtgaccccacta
aaattcacacgaatttcctccagacgggcagacataatgatccagtttggagcccgctcg
catggagatttcatcccatttgatggccctaatggagttctagctcatgcctttgctcca
ggtagtggcataggaggtgatgcccattttgatgaagatgaaagatggaccagtactagt
gcaggtttcaatttgttccttgtagcggcacatgaatttgggcactcgctgggattagac
cactctagagacccacgtgcgttgatgttcccaagctatcgttatatgaacaccaggaac
ttccgcttgccacaagatgatgtcaatggaatacagtcaatatatgggagaaaaactggc
aaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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