KEGG   Xenopus tropicalis (tropical clawed frog): 733454
Entry
733454            CDS       T01011                                 
Symbol
rpgr
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator
  KO
K19607  X-linked retinitis pigmentosa GTPase regulator
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:xtr03037]
    733454 (rpgr)
Cilium and associated proteins [BR:xtr03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   733454 (rpgr)
SSDB
Motif
Pfam: RCC1 RCC1_2
Other DBs
NCBI-GeneID: 733454
NCBI-ProteinID: XP_031752069
Xenbase: XB-GENE-982274
UniProt: A0A8J1J2J5
Position
2:58079337..58108552
AA seq 1225 aa
MAAEEGEDQVPDSGALFTFGKSKFAENIPSKFWLKNDKPARISCGDEHTVLVTGNGKLYV
FGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEGQ
LGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGT
IYCTPQKVDTGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRV
LGLSGKVTMVSCGGEHTIAVTEKEVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIR
YVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGG
CHMLVFATPRPQESEVIINDELKENLLVVPSLNGDSEMSTSLQRSHSARLRRREKETSPE
QFRGLNRTLPPLRNHSLNSSFLASSKTVPTRLLQVSESNSGSYKETHLQDLTPNSKPDAA
DNGENLVQSFSAHDTDSDNQPEGYGNTPDVLNMTHAMSLNPANKTLSFSPVQKRKKNTKN
VKLKYDGKVDTVQMNKSRSQQLSLMSSKSQSSDGGDSSAGQNSQYSSADVTEELPIALKI
IKEKFHKARETSKLKFFSSQEQMQTDVPSSEHQLMASNLSDKRYERQSDSTITERQKQHS
KHPNMICVKNLEGKNGQKTLKFSAKGSFVSKAEISSSSSSLVSSADMSDSRIKRSHKKQH
ANLHSIQGDEINRLGSSKQKLKENNKEMQKLCDESDSQINMAELDTEVEQEGEDEQKSKK
GGTWDEDEDAEEEGEGNTNERVVEVEGHKEEEGTENEEEGEDVGGTEVEEKDSEEEDEEG
EERMYGEEEGKDEEGALKEGEDEEEEEGEDKGENEEEEEGEDKEEEEEEGEDKDQGEDEE
EGGENEEEEGKEEEQEEDGEDEEEEDGEDEEEKEGEDEEEEEGEDEEEEEGEDEEEEEGE
DEEEQEGEGEDEEEKEGEDEEEEEGEDEEEEEGEDEEEEEGEDEEEEEGEDEEEEEEEEG
EDEEEEEGEDEEEGEDEEEEEEEGEDDEEEEEGEDDEEEEEEEEEEAEDEEEEEEEGEDE
EEEEGEDEEEEEEGEDEEEEEGEDEEEEEGEDEEEEGEDDEEEEDEDDEEEEDEGENLGK
KEKHEEEVVGKGKNRKQESKEKSKPKKPSQKMPKQKKNDSNMKNQRIKKIKMPHYEDIEK
FKKIEELDNSVQFWDSILPHYLNLK
NT seq 3678 nt   +upstreamnt  +downstreamnt
atggcggcagaggagggggaagatcaagtacccgattcgggtgcattatttacttttgga
aaaagtaagtttgcagaaaacattccaagcaagttctggttaaaaaatgataagccagct
cgcatatcatgtggtgatgaacacactgtgttggtaacagggaatggaaaactttatgtc
tttggaagtaacaactgggggcagctgggtgtagaagctggaagtgccatcagcaaacca
acctgtgtaaaagcactaaaatcagaaaaggttgtacttgctgcatgtggaagacatcat
acattggtctacacagaacaaggaaagctgtattcctcaggtggcaatagtgagggacag
ctgggcctaggggacacagcaggaaggacaagctttcaagaaatttctttttttactgct
caatataaaattaaacaactctcggctggatcaaatatgtcagctgctcttactgtggat
gggaaactttttatgtggggagacaactcagaaggtcagcttggcttggagaaaggaacg
atctactgtactcctcaaaaagtggatactggaaaacccattgcttggatttcctgtggc
tattaccattcagcctttgtgacacaagatggggaattatatacttttggagaacctgaa
aatggaaaacttggtcttccccctgataagataaaaaaacataaaaaacctcaacgtgtt
ttaggactgtctggaaaagtgacaatggtctcctgtggtggggagcacactatagcggta
acagaaaaagaagtatacacctttggccttgggcagtttgggcaacttgggcatggcaca
tttatttttgagacccacataccaaaagcagtagatgcattgacaaaaaagaaaatccga
tatgttacttgtggagaaaatcacacagccataattacagaaaagggacttctctataca
tttggagatgggcgacatggcaaacttggattgggggaggagaattttaccaatcagttt
gtacctatcctgtgttcaaatttcctgaagtttacagtgcagtcggtggcctgtggtgga
tgccatatgctggtctttgcaactccaaggcctcaggaatcagaggtgatcattaatgat
gagctaaaggaaaatcttttggtagtcccttctttgaatggtgatagcgaaatgtctaca
tcattacagagatctcattctgcacgccttcgaagaagagagaaggagacatcacctgaa
caatttcgtggcttaaatagaacgttaccacctttgagaaatcattcccttaactcttcc
ttccttgcttcaagcaaaacagttcctacacggttacttcaagtgagtgaatccaattcc
gggtcatacaaagaaacccacttacaagatctaacaccaaactctaaacctgatgctgca
gacaatggggaaaaccttgttcaaagtttttctgcacatgatactgatagcgacaatcaa
cctgaaggatatggcaatactcctgatgtcttaaacatgacacatgcaatgagccttaac
cctgctaacaaaaccttaagcttttctccagtacaaaaaagaaaaaagaacactaaaaat
gtgaaactgaaatatgatggtaaggtggacacagtacaaatgaacaaaagcaggtcacag
cagctttccttaatgtcatctaaatcccagagttctgatgggggtgattccagtgctggc
cagaactctcagtactcaagtgcagatgtaactgaagagctaccaatagctttgaaaata
ataaaagaaaaatttcacaaggctagagaaaccagtaaattaaagtttttctccagccag
gaacaaatgcaaactgatgttcccagcagtgagcatcagcttatggcctctaacctttca
gataaaagatacgaaaggcaatctgatagcacaataactgaacgtcagaaacaacattct
aaacatcctaatatgatatgtgttaaaaatctggagggtaaaaatggtcaaaaaacctta
aaatttagtgctaagggtagttttgtaagcaaggctgaaattagttcatcctcctcaagt
ttagtatcatcagctgacatgtcagatagtagaattaaaagaagtcataaaaagcaacat
gcaaatctgcattccattcaaggagatgaaataaatagattagggagttccaaacagaaa
ttaaaagaaaataataaagaaatgcaaaagctttgtgatgaaagtgatagtcagatcaat
atggcagagctagacacagaagtggaacaagaaggagaagatgaacaaaaaagcaagaaa
ggagggacttgggatgaagatgaggatgcagaagaggaaggcgagggtaatacaaatgaa
agggtggtagaagtggaaggacataaggaagaggagggaacagaaaatgaggaggagggg
gaggatgtaggtggtacagaggtggaggaaaaagatagtgaggaagaggatgaagagggg
gaggaaagaatgtatggtgaagaagaaggaaaagatgaagagggggcattgaaggaggga
gaggacgaagaagaggaggagggagaagacaagggagagaacgaagaagaggaggaggga
gaggacaaagaagaagaagaagaggagggagaggacaaagaccagggagaggatgaagaa
gaggggggagagaatgaggaagaggaagggaaggaggaagaacaggaggaggatggagag
gatgaagaagaggaggatggagaggacgaagaagagaaggagggagaggatgaagaagag
gaggagggagaggacgaagaagaggaggagggagaggatgaagaagaagaggagggagag
gatgaagaagagcaggagggagagggggaggatgaagaggagaaggagggagaagatgaa
gaagaggaggagggagaagatgaagaagaggaggagggagaagatgaagaagaggaggag
ggagaggatgaagaagaggaggagggagaggatgaagaagaggaggaggaggaggaggga
gaggacgaagaggaggaggagggagaggatgaagaggagggagaagatgaagaagaagag
gaggaggagggagaagatgatgaagaggaggaggagggagaagatgatgaagaggaggag
gaggaagaagaggaggaggcagaagatgaagaagaggaggaggaggagggagaagatgag
gaggaggaggagggagaagatgaggaggaggaggaggagggagaagatgaggaggaggag
gagggagaagatgaggaggaggaggagggagaagatgaggaggaggagggagaggatgat
gaagaagaggaggatgaggatgatgaagaagaggaggatgagggagaaaatttaggaaaa
aaggaaaagcatgaagaagaggtagttggtaagggaaaaaatagaaaacaagaatctaaa
gaaaagtctaaaccaaagaaaccatctcagaaaatgcctaaacagaagaaaaatgatagt
aatatgaagaaccagaggataaagaaaattaagatgccacattatgaagatattgaaaaa
tttaaaaaaatagaggagctagataattcagttcagttctgggatagcattttacctcat
tacttgaatttaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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