KEGG   Xenopus tropicalis (tropical clawed frog): 733488
Entry
733488            CDS       T01011                                 
Symbol
pard6b
Name
(RefSeq) partitioning defective 6 homolog beta
  KO
K06093  partitioning defective protein 6
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144  Endocytosis
xtr04530  Tight junction
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    733488 (pard6b)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    733488 (pard6b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    733488 (pard6b)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Centriolar satellite
     733488 (pard6b)
SSDB
Motif
Pfam: PB1 PDZ PDZ_6
Other DBs
NCBI-GeneID: 733488
NCBI-ProteinID: NP_001122111
Xenbase: XB-GENE-489861
UniProt: B3DM40
Position
10:complement(35721600..35745999)
AA seq 377 aa
MNRGHRAAGTSSRSLGTVEVKSKFGAEFRRFALEKTKPGKFEEFYGLLQHVHKIPNVEVL
VGYADIHGDLLPINNDDNYLKAITTASPLLRIFLQRKEEADYSAFGTGTLTKKRTVLSTV
LHPELNKKKPHIVISMPKDFRPVSSIIDVDILPETHRRVRLYKHGMDKPLGFYIRDGSSV
RMTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANS
HNLIITVRPANQRNNIVRNSRNSGSSGQSTDSSTSMQGHVTPQQIVQNYLPEDAESDEED
IIIEENGDPQQIPKAIPTSESLESLTLMETYHDSSQNGYIPTNTYRMHLSTTGGSLEQLG
NNHDKKIFEEDGTILTL
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaaccgggggcaccgggcggcgggtaccagcagcaggtccctgggtactgtagaggtg
aagagcaagtttggggcagaattccggcgctttgcattggaaaagacaaaaccgggaaaa
tttgaagaattctatggattactccagcacgtgcacaaaatcccaaacgtggaagtattg
gtgggctacgccgatattcacggggacttattgccgatcaacaatgatgacaattatctt
aaagcaataacgactgcaagccccttgctccggatatttttgcaaagaaaagaggaggcc
gactacagtgcgtttggcacgggcaccttaaccaaaaagaggactgttctttcaacagtg
ttgcacccagaacttaacaaaaagaagccgcacatagttataagcatgccaaaggatttc
aggcctgtttcatcaatcatagacgtggatatccttcctgaaacccaccgccgggttcgg
ctctacaaacatggcatggataagccccttggtttctacatacgggacggctcaagcgtc
cgaatgaccccgcacggactggagaaagtgcctgggattttcatatcgcggcttgtacct
ggtggacttgcacagagcaccggtttgctggccgtcaacgacgaggttcttgaagtcaac
gggattgaagtttccggaaagagcctcgaccaagttacggatatgatgattgcaaacagt
cacaaccttattataacggtaaggcctgccaaccagaggaacaatattgtccgaaacagc
cggaattcgggaagctctgggcagtctaccgacagcagcacaagtatgcagggccatgtt
acccctcagcagattgtgcagaactatcttccggaagacgccgagagcgacgaagaggac
attatcattgaagagaatggtgatccccaacagattcccaaagccattcccaccagtgag
agcttggaatccttaacgctcatggaaacgtaccacgattcatctcaaaatgggtacatc
ccaacgaacacttacagaatgcacctcagcaccactgggggcagcctggagcaactggga
aataaccacgataaaaaaatcttcgaagaagacggcaccattcttacactgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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