KEGG   Xenopus tropicalis (tropical clawed frog): 733722
Entry
733722            CDS       T01011                                 
Symbol
abraxas1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1
  KO
K20774  BRCA1-A complex subunit Abraxas
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    733722 (abraxas1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    733722 (abraxas1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     733722 (abraxas1)
SSDB
Motif
Pfam: MPN_2A_DUB_like Med9 COG3_C DUF643 GAS Seryl_tRNA_N T4SS DUF2508
Other DBs
NCBI-GeneID: 733722
NCBI-ProteinID: NP_001037959
Xenbase: XB-GENE-5730310
UniProt: Q28HX0
Position
1:136195448..136207198
AA seq 408 aa
MEGESTTAVMSGFVFGALTFHHLNSGSDTEGFLLGDVVGEAKNSITDSQMDDVEVLYTID
IQKHVPCYKLSRFYNVLGDLNIPELKKLLADQKKSQNVIGWYKFRHNTEQIMTFRERLLH
KNLQEHLSNSGLVFLLLTSNPATETKSTHRLEYALHKPQDGFFHKVPLVISNLGMSDQQG
YKTLCGSCVSVGLNTTIKKHRLEFFNEDGALAEVNRISNMYTTLQDELKKTCSQLVESEH
SVEQLLEAINELKKQIAEKKKLNEETGNKVSEAPEENVLLCEALRKFFPQSTLLQSCRLS
LGGRQIPHSCTASHNISDVNELTLMVKQYDIPEAHTRQAGKRKACSKQLGRTLTKKSRLL
QLQKQHSQNGDSEGSDSERPLCNSGTETDGDILESLHMDVSRSKSPIF
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggaaggggagagcactactgctgtcatgtctggctttgtgtttggcgccctcaccttc
caccatctgaactccggatcagacacagagggctttctgcttggagatgtcgtgggtgaa
gcaaagaattccattactgactcccagatggatgatgtggaagttctttatacaatagat
atacagaaacatgtaccatgctacaaactttccagattttacaatgtacttggagacctg
aatattccagaattgaaaaagttgcttgcagaccaaaaaaagtctcagaatgttattggc
tggtacaaatttcgacataatacagaacagataatgactttcagagagaggctcctccac
aagaacctgcaggaacacttatcaaactcagggctcgtcttcctgttactaacctcaaac
ccagcaacagagacaaaatccacacaccgcctggagtatgctcttcataagccacaagat
ggctttttccacaaggtgcccttggtcatttccaaccttggaatgtcagaccagcagggg
tataaaacgttatgtggatcatgtgtttctgttggcttaaataccactattaaaaagcat
aggttggagttctttaatgaagatggtgcattagcagaagttaacagaatcagtaatatg
tacactactcttcaagatgaactaaagaagacttgcagtcagctagtagaaagtgagcac
tcagtggaacaacttctggaagcaattaatgaattaaaaaagcaaatagctgagaagaaa
aagctcaatgaagaaacaggaaataaagtctctgaagccccagaagaaaatgttctgttg
tgtgaagctttacgcaaattctttcctcagtctactctgctgcaatcttgccggctttct
ctgggaggaaggcagataccccacagctgcactgccagccacaacattagtgatgtaaat
gaactgaccctcatggtcaaacagtatgacatcccagaggcacacaccaggcaggctggt
aaaagaaaagcttgctcaaaacagcttggtagaaccctaacaaaaaagtctcggcttctt
cagcttcaaaaacagcactctcagaacggtgacagtgaaggcagcgacagcgagagaccg
ttgtgcaacagtggcacagagacagatggtgatattctagaaagtttacacatggatgtc
tctcggtccaagtctccaattttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (35)   

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