KEGG   Xenopus tropicalis (tropical clawed frog): 779454
Entry
779454            CDS       T01011                                 
Symbol
gtf3c1
Name
(RefSeq) general transcription factor 3C polypeptide 1
  KO
K15199  general transcription factor 3C polypeptide 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    779454 (gtf3c1)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIC
     779454 (gtf3c1)
SSDB
Motif
Pfam: B-block_TFIIIC DUF6581
Other DBs
NCBI-GeneID: 779454
NCBI-ProteinID: XP_002938335
Xenbase: XB-GENE-5913390
UniProt: A0A6I8Q266
Position
9:40234477..40314404
AA seq 1999 aa
MEVLDAIVDEVALEGLDGITIPALWLRLQARVPPFPLLLDEATKEFIWQSLAVHPELEFY
ELPVERQPLVLSNRYEGIDCDPVVLKAKGGPCSEDIYPIHIISENKDGIQGSCQFFEERI
LVTDQLRMHTFTCEQVFERWGEKLLIVGSQALRLRALIGWEGDPTVLLPDCSYCILEKLG
RSRWQGELQRDLQGSFKVDAGKIHYLRRALDRNGLITMQSHIIKLSNGTQQHSLLLLLKR
FHIDRRNKYDMLSEKVSALLSECENQIETLINLREELGVHERIFKRLYYYMANAGIVKII
SLPLQELQPLAERCKTKRGTDIMVRCVKLLKEYKRKVDDSDDDEEEDIRNRIVPVDIICE
KDMLTQTYELIENRGTKGISQSEIRMAMNVGKLEARMLCRLLERYMLIKGFMEDEGRQRT
TKFISHVFVEESDLRRQFLEEKAKSEKLSMFSLASVQKVGENSMATEDNTYLEADNLKEE
DIEIKKQKEHEANPLPSQLSIYPSNTSTPRGKSKILVQRALPKDGDKSSVLSENECSLDS
FQPESNLSTLSAHSEDEDDVSVIEEVHDKKVESKKGRRGSKQGVLERSHETYRLLKRRNI
IVEAVKNLRLVESLFTLQKMIMEQEKLEGVSTRCCKKSILRLVHKLSQEGLVRLYRTTVV
QDGISKKVELVVHPSINPTDPLVKSAIEQIRFRISNSSGNRTRSPQGMGTSNKADDHSKE
GTMGKTQNAPSNQHDNSSKVQQNTDEKMGVLPLRNYHPVIVPGLGRSLGFLPKMLRLKVT
HLFLWYIVHGHHIRKLPQEQTTNKDATSSDAIGEQPDNAESIVSDNISCQKDSKTYRESQ
TLNSEEPFVDPTPEQIVETVYVNDSSWMRYVPPSTIHSEYGPGWVLVSDVLLCLPLSIFI
QIVQVSYKVDNLEDYLNDPVKKHTLIRCLPRSIRQQLLYKRRYVFSVFHGLQKLNCMGLL
QFGSTEKFQDKDQIFLYVRKKATIVDTTACDPHYNLAQGSKPFDKRYYSFDTLQEVEKFW
FDLQFVCLNTPLGVVRIRGKKMNPQTQEENVLDPDNEQEERSNLERKSENLESIPGSREV
VDDGSIPGDGLGAGGLDSSFYSHLKRNWIWLSYIFNKTSKSKDNGFTMRLQTFLNKHTLP
LGTRGSQTHFWGDKNLVGKSELVEVVKEAAENRNERVCGGKGRKRKRFKKDIGPKRKAKK
KKSDPYKNRRYHDEADQSALQRMTRLRVAWTAQEDGLLMLCRIASNILNKKVKRPFVPWQ
VVRDIMHASLEESLDKTSHSVGRRARYTIKNPQTYLNYKVCLAEVYQDKTLIEEFMAVKK
NYDDPKVCAAEYKELVERLKKKFSSTLGYPTYEIPDTVDELFARYRILAVGEQTDKEGGT
EILDSVNDIYGLVVENLILSTLSLSDKQIKTCRSLQTFRIFRAYRDDILVKAFLEFQSRR
LVNRRRGNHMLGPKKHRALPFVPMSYQLSQSYYRLFTWRFPIATCTESFQFLELLKATGY
EDQVDSFSFSDQDIEETDMVLFPLDGPGGQCATVLSLLLLGLVTISVKIPDQIVVVDSTL
VDNEVMKGLGKVGMDDEDFEDEYVDETSQKRKIEVKARQASHTNYLLMRGYTAPGIVSTR
NLNPNDSVVVNSCQVYLKLKETPLSTSLRTPVSAQDVTDAANSLPYNFTGLLNTKKTSFD
TFLNDCAQCHGYSLRDLSCMSEIYSAIEACSFRGIKITDLLNRFYWWEDLDSERTKYLQQ
YLKDLLTSSQVLEVGGASVRLVAMKHAYPWVQHSDYIKEPITQETESLNQDPDCVESAPL
VVENTPESTESCSEPPMKKARSEDSNHVSQTDLDISLMSPSLSIRMGENVQYQNQDTEES
VETLHERESDCCFLGRPWRIVDGTLNKPVCKGMLEAVLYHIMTKPGITEISLLKHYSGVL
QPVVVKEVVQVLEQIGCIKKSYIEKSSKVSLFSPTAIPQLMEKPKIKDDPIIFYEPTIDC
TWRLGGIFPSEVNWNKWVM
NT seq 6000 nt   +upstreamnt  +downstreamnt
atggaggtattagatgcaattgttgacgaggtggctctggaaggcctggacggaataact
attcctgctctttggctgcggctgcaggctcgtgtccctccttttcctttgcttctggat
gaggctactaaagagttcatatggcagtcactggcggttcatcctgagctcgaattctat
gagctgcctgtagagaggcagcctctggtacttagcaatcggtatgaaggtattgactgt
gatcctgttgtcttgaaagccaaaggaggcccctgctctgaggacatatacccaatacat
attatttctgaaaataaagatggcattcagggctcctgtcagttttttgaagaaaggatc
ttagttacagaccagttgagaatgcacacttttacatgtgaacaagtgtttgaaagatgg
ggagaaaaacttctaattgttgggtcacaagccttgcgtttaagagctttaatcggttgg
gaaggggatccaacagtactgcttccggattgttcgtactgcatacttgaaaaactggga
aggtccagatggcaaggggaacttcagagagatcttcaaggatcattcaaggttgatgct
gggaaaatccattatctgagacgtgcactggataggaatgggcttataacaatgcagtcc
catataattaaattatccaatggaactcagcagcattcattacttttgcttctgaagaga
tttcatattgataggagaaataagtacgatatgctgtcggagaaagtgtcagccctattg
agtgaatgcgagaatcagatagaaactctgattaatcttagggaagaactgggagtgcat
gagcggatattcaagcgcctttactattacatggcaaatgctggaattgtgaaaataatt
tctttacctttgcaagaattgcagccacttgcagagcgatgtaagactaaaaggggcacc
gatataatggtccgttgtgtaaaacttctaaaggaatataaaagaaaagttgatgattct
gatgatgatgaggaggaagatataagaaatcgtattgtccctgtggacataatttgtgag
aaggatatgttaacacaaacctatgagctcattgaaaataggggaaccaaaggaatttct
caaagtgagatcaggatggcaatgaatgtgggaaagctggaagcccggatgttatgccgt
ttattagaaagatacatgctcattaagggattcatggaagacgaaggtcgtcaaagaacc
acaaaatttatttcccatgtatttgttgaagaaagtgacttgcgcagacaatttttagaa
gaaaaggcaaaaagtgaaaagctgtcaatgtttagtttagcatctgttcagaaagttgga
gaaaactcgatggcaactgaagacaatacatacttagaggcagataacctaaaagaggaa
gacatagagattaaaaagcaaaaggagcatgaggcaaatccgcttccgagtcagctttcg
atttaccctagcaatacatcaacaccaagaggaaaatccaagattcttgtacaaagagct
ttgcctaaagatggagataagagttctgttctatcagaaaatgagtgtagcctggacagc
ttccagcctgaatccaacctttccaccttatctgcacactctgaagatgaagatgatgtt
tcagtaatcgaagaagttcatgataagaaagtagaaagtaagaaaggcagaagaggttct
aaacaaggagtattggaacgatcgcatgaaacctatcgcctcttgaaaagacgaaacatt
attgttgaagctgttaaaaacctgcgattagtggagagcttgttcacgcttcagaagatg
ataatggagcaggaaaaactggaaggtgtatctacaagatgctgcaaaaaatccatcttg
agattggttcataaactttctcaagaaggacttgtaaggttgtaccggaccacagttgtg
caggatggaatcagtaaaaaagtggagcttgttgttcacccttcaattaatcctactgat
cctttagtgaaaagtgcaattgaacaaatacgttttcgtatctccaattcatcaggaaac
aggacacgttctccacagggcatgggcacatcaaacaaggcagatgatcacagtaaagaa
ggaacaatgggcaaaacacagaatgctccatcaaatcagcatgacaactctagtaaagta
cagcaaaatactgatgagaagatgggagtattaccattaaggaattatcatccagtgata
gttcctggacttggtcgctctcttggctttcttcctaaaatgctcagactaaaagtaaca
cacctttttctctggtacattgtccatggtcaccatataagaaaacttccacaagagcaa
acaaccaataaagatgctacttccagcgatgccattggggaacaacctgataatgctgaa
tcgattgttagtgacaacatttcatgtcaaaaggatagtaaaacatatcgagaaagccag
actttgaattctgaggaaccctttgtggaccctacaccagagcagattgtggaaactgta
tatgttaatgactcctcttggatgagatatgttccaccttctactatacatagtgaatat
ggcccgggctgggttcttgttagtgatgttctgctttgcttgcccctctcaatcttcata
cagattgttcaagtcagttacaaggtggataatcttgaagattatctaaatgatccagtg
aaaaaacacacattgatcagatgtttgccaagatctatccgacagcagctgctgtacaaa
aggaggtatgtgttttctgttttccatggtctccaaaaattaaactgcatgggattgttg
cagttcggttcaacagaaaagtttcaagacaaagaccagatatttttgtatgtgagaaag
aaagcaacaattgttgacacaacagcctgcgacccacattataaccttgcacaaggaagc
aagccttttgataagcgatattatagttttgatactttgcaagaagtggagaaattttgg
tttgatttacagtttgtctgtctgaatacacctttaggtgttgtccgtattcgtggaaag
aaaatgaatcctcagactcaagaggaaaatgttcttgatcctgacaatgaacaggaagag
agatcaaatttggagcggaaatctgaaaacctggaaagcatcccaggcagtagagaggta
gttgatgatgggtctattccaggagatggactgggagctgggggacttgactcaagcttt
tacagtcacctgaagcgaaactggatatggttaagctacatttttaacaaaactagcaag
agcaaagataatggctttacaatgagactccagacatttctaaataagcatactttaccc
ctgggtacaagaggtagccaaacacatttttggggagataagaatttggtaggaaaaagt
gaacttgttgaggttgtcaaagaagctgcagagaatcgtaatgagcgggtgtgtggtggg
aagggccgaaagagaaaaagatttaaaaaagatatcggaccaaagagaaaagcaaagaaa
aaaaagagcgacccatacaagaatcggcgataccatgatgaggcagatcagagtgcatta
caaaggatgactcgtctgcgagtggcttggacagcccaagaggatggcttgctcatgttg
tgccgaatagcaagtaacattctgaataaaaaggtgaaaagaccatttgttccttggcaa
gttgtccgagatattatgcatgctagcttggaagaatcacttgataaaacatctcattct
gttggtcgaagagctcgttacactataaaaaatccccagacatatcttaactataaagta
tgcttggcagaagtctaccaggataaaacacttattgaagagtttatggctgtaaagaag
aattatgatgatcctaaagtttgtgctgcagagtataaagaacttgtagaaagactcaag
aagaaatttagttctactctgggttatccaacatatgaaattcctgatactgttgatgaa
ctctttgccaggtacagaattttggccgtgggggaacaaacagataaagaggggggaaca
gaaattcttgacagtgtgaatgatatctatggtctggtagtggagaaccttattttgagt
acattgtctctctctgacaagcagataaaaacctgtcgatcacttcaaacttttcgaatt
ttcagagcatatagagatgacattttggtcaaggctttcctggaatttcaaagtagaagg
ctggtaaatcgtcgaagaggaaatcatatgcttggtccaaagaagcatcgtgccttgcca
tttgtgcccatgtcatatcagttatctcagtcgtactacaggctctttacttggcggttt
ccgattgcaacctgcacagagtcctttcagttccttgaactgctgaaagcaactggatat
gaagatcaggttgatagtttttcatttagtgaccaagatatagaagaaacagatatggtg
ttgtttccattggatggaccaggtggacagtgcgcaactgtattatctcttctgttactg
ggccttgtcacaatcagtgttaaaattccagaccagattgtagtggtggactctaccctt
gtggacaatgaagtaatgaaaggccttggaaaggttggcatggatgatgaggattttgag
gacgagtatgtggatgaaacgagtcagaagcgaaaaatagaagtgaaggctagacaggct
tctcataccaactacctgctaatgagaggttacactgcaccaggaatagtcagcacaaga
aatctgaacccaaatgatagtgtggttgtgaactcatgtcaagtttatttgaaactaaaa
gaaacacctctgagtacaagtctgagaaccccagtttctgcccaagatgtcactgatgca
gcgaattctctgccttataatttcactggacttttaaataccaaaaaaacaagctttgat
acatttcttaatgactgcgcacaatgtcatggttacagcttgagagacttatcttgtatg
tctgaaatatattctgctattgaagcctgttccttccgtggaattaaaataacagatctt
ttaaatcggttctattggtgggaggatctagactctgaaagaacaaaatatttgcagcaa
tacttaaaggatctcttaacttctagccaggtcttagaagtaggaggagcctcagttaga
cttgtggctatgaaacacgcatatccttgggttcagcattctgattatataaaagaaccc
ataacacaagagacagaaagtcttaatcaagatcctgactgtgttgaatccgctccactt
gtggttgagaacactccagaaagcactgaaagttgttctgagcccccaatgaagaaagca
cgttcagaagatagtaaccatgtgagccagacagatttagatatatctttgatgtctcca
tctctgagcatcaggatgggggagaatgttcaataccaaaatcaagacacagaagaatct
gttgagacattacatgaaagagagtcggattgttgtttccttgggagaccttggagaatt
gttgatggcaccttaaacaaaccagtgtgtaagggtatgcttgaagcggtcttataccat
ataatgaccaagcccgggataacagagataagcttactaaagcattacagtggtgttctc
caacctgttgttgtcaaggaagtggtacaggtattggaacagattgggtgtattaaaaag
agttacattgaaaaaagttcgaaagtttccttattttcacccactgcaattccacagctg
atggagaagcctaaaataaaagacgaccccattatattttatgaacctaccattgactgc
acttggagacttggtgggatttttccatcagaagtgaactggaacaaatgggttatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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