KEGG T01011: 779622

Xenopus tropicalis (tropical clawed frog): 779622

Entry

779622            CDS       T01011

Symbol

med1l

Name

(RefSeq) mediator of RNA polymerase II transcription subunit 1 isoform X1

K15144

mediator of RNA polymerase II transcription subunit 1

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Brite

KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    779622 (med1l)
Transcription machinery [BR:xtr03021]
Eukaryotic type
  RNA polymerase II system
   Mediator complex
    Middle
     779622 (med1l)

SSDB

Motif

Pfam:

Med1 DUF3432

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

Position

6:complement(64483169..64515803)

AA seq 689 aa
MEFSLLPAQRESEVTRLVPVKHLEKSLLEKLRLKYSQKPWNETIKLTRLCLDKPVGNALK
CSLYHPVLRCKNMLQEALKAKSLSVILSRIECISKQKGLDSHLGPNEKICYITSEMFYIE
VQVKKNGNVSSVKLAHHGETPVVCNELLQFLRAKDFKAFGRSLEGLLLLYNIPGNSEIKA
KVYIALRSLEADLSAMFNLYSSKKPNDKEFAILHGQVGYLSPRCGGTPMGIEYYISPCVL
LEEKLKPGSLVGGYKAYLSIMGSNNWFLLPNSPLFSGLQQDSNMPSFSVLTEECSMDLPA
CFCFMFTDPLPLLLPFVQKIQCITGLPVAGIKQAPFHELITHLENSCCTTDEASTDAQFI
LSIPDCRDHCYAITSVTDNKEALMGILVDKIPFTHPSQVPPTLEVLRHQAAYSTLINSCI
SSTRKTKECTDMTHFEISLQKNCRIGISFQNPSGVGLSCVAVDVLSSRQLKCILYKDAVD
PSFPCNNEFIVKVLQCCMSIPITMRAILKKSQNTRAVSKMETYSATVHPLTTQGIERDVS
MALHHDKQQVNSPDKKVLGHNKHKAVNGNLGHEMAAQSAEHNSDFTIETYRFAAQFNCNI
VEEQSTSFAKESSPIMAEGPVPLMAEVPCQVMLGGPSSVILEVSSPVLSEEPSSSMTEHS
SSFTGDLSTSITEEFNLNVSGFMVSEKKN

NT seq 2070 nt +upstreamnt +downstreamnt
atggaattctctttgcttcctgcgcaacgggaaagtgaagtcactagactggttcctgta
aagcatctggagaaaagtcttttggaaaagttgcgcttgaaatactctcaaaagccatgg
aatgaaacgattaaactaactagactgtgtttggacaaacctgttggaaatgcattgaag
tgctcactgtatcatccagtgttaagatgcaagaacatgctacaagaagcactgaaagca
aaatccctgtctgtaattttgagccgcatagaatgtatatccaaacaaaaggggctggat
tcccaccttggtcctaatgaaaaaatttgctatatcacctcagaaatgttttacatagaa
gtacaggtgaagaaaaatggaaatgtgtcttctgtcaaactggctcatcatggagaaaca
ccagtggtctgcaatgagctactccaattcctcagggcaaaggattttaaagcttttggt
cgaagtttggaaggactactacttttatacaacattccaggaaacagtgaaataaaagct
aaagtgtatattgccttgaggtccttagaagcagatctgagtgcaatgttcaatctttac
agctctaagaaacctaatgataaggaattcgcaattttgcatggacaagtaggttatctc
tcccctagatgtggaggaactcctatgggtattgaatattatatatccccatgcgtgctt
ttggaagaaaagctaaagccaggatcattggtgggtggatataaagcctatctgagtatt
atgggctcaaacaattggttcctgcttccaaattctccactgttcagtggacttcagcaa
gatagcaacatgccttcattttctgtgcttactgaagaatgtagtatggatttgcctgct
tgcttttgctttatgttcactgatcctttaccattactactaccatttgttcagaaaata
cagtgtattacaggacttcctgttgctggaataaagcaggctccatttcatgaactaatt
acacacctagaaaatagttgctgcacgactgatgaagccagtacagatgcccagtttata
ctgagtattccagattgcagagatcactgctatgccattacaagtgtaacagataacaaa
gaagctcttatgggtatcttggtggataaaataccctttactcatccaagccaagttccg
ccaacattggaagtgcttcgccatcaggctgcttatagtactcttatcaacagctgcatc
tccagtaccaggaaaacaaaagaatgtacagatatgactcactttgaaatctccttgcaa
aagaactgcagaattggcatttcatttcaaaatccgagtggcgtcggtctttcatgtgtt
gctgttgatgtcttgagctccaggcaattaaaatgtattctgtacaaggatgctgtggac
ccttcctttccctgcaacaatgagtttatagtgaaagttttgcaatgttgcatgtccata
cctatcactatgagagctattctaaagaagtcgcagaatacgagagctgtctccaagatg
gaaacttactctgcaacagtgcatcctctaactacacaaggcattgaaagggatgtttca
atggctttgcaccatgataagcagcaagtaaacagtcctgacaagaaagttttggggcat
aacaaacataaagcagtaaatggcaatttaggccatgagatggcagcacagtcagctgaa
cataattctgactttacaatagagacttatagatttgctgctcagttcaattgtaacatt
gtagaagaacaaagtactagctttgccaaggagtccagtcctataatggcagagggccct
gtgccgctcatggctgaggtgccttgtcaagtaatgctgggcggccctagttcggtcata
ttggaagtttcaagtccagtcttgtcagaggaacccagctctagtatgacagaacacagt
tcaagttttacaggtgaccttagtacaagtattacagaagaattcaatttaaatgtttca
ggtttcatggtttctgagaaaaaaaattga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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