KEGG   Xenopus tropicalis (tropical clawed frog): 779742
Entry
779742            CDS       T01011                                 
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b
  KO
K23213  paired amphipathic helix protein Sin3b
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    779742 (sin3b)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     779742 (sin3b)
SSDB
Motif
Pfam: Sin3a_C PAH Sin3_corepress Baculo_p33
Other DBs
NCBI-GeneID: 779742
NCBI-ProteinID: NP_001072289
Xenbase: XB-GENE-480338
UniProt: Q0VA09
Position
1:111956118..111978212
AA seq 1126 aa
MASGGGGGNCKPNSNWSKPQEKLPVHVEDALSYLDQVKIRFGSDPATYSGFLEIMKEFKS
QSIDTPGVIRRVSQLFHEHPDLMLGFNAFLPLGYKIELPKNGKVVVQTSLASPVSSDATT
SSLSSSRVIVPPVPENVLSEVPEESRQQEKEKPQPPPESDSLEFHNAISYVNKIKTRFLD
RPEIYRSFLEILHTYQKDQLNPKGRPFRGMSEEEVFTEVASLFRGQEDLLSEFGQFLPEA
KRSLFTGNGACDLSSRKLEYQRNLEQSRKRSRPLLLRSMPSSKKKMKMRKSKDQSMASVG
KYGTLQEFSFFNKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVTPFLGKFPELFA
QFKSFLGVKELSFASPVTNDRSNEGIGREIDYASCKRIGSSYRALPKSFPHPKCSGRTAL
CKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESV
QKKLSRMSPEDQEKFRLDDRLGGTSEVIQRRAIYRIYGDKAPDIVESLKKNPVTAVPVVL
KRLKAKEEEWREAQRGFNKIWREQYERAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESV
YDERQEQQPDGRTTTSSGPHLIYTYEDWQILEDAAALITFYVNRQPTIQKEDKDTIWQVL
HQFLPELFFSSSSSSPSCQSLFAASADEGPTETVTESSVTELPERRRKTVTTEVAQEPPP
PVETPHEPPPKTIDEVYSLFYTNNNWYFFLRLHHTLCSRLLKIYRQAQQQLMEYRTEKER
EKRLFDGRRDRSNGPAMELRLKQPSEVELEEYYPAFLDMVRNLFIGNLDPTHYEDTLREM
FTIHAYIVFTIDKLVQNITRQLHHLVSDEICLKVVELYLSEKKRGAAGGSLASQCVRAAK
EASYQWKAEHCMTDENCFKMMFLQRQGQVTMTIELLDTEDVQTEDPTEVQHLANYMEQFI
NVDGAHSSQSEGFVLKPVLLQRNIRSFHSWQYRTMRVMKDEVKSSWKKLMGVESASNMDC
RFRLNSHKMMFIINSEDYMYRWGTLSGAREVQPQVFQRHHEKFSEWHNRWLEENVSPRAA
QVIQDWLTGEEDEEMVPCKTVCENSEVHGMSVTRYRVQYPRRAASP
NT seq 3381 nt   +upstreamnt  +downstreamnt
atggcgagtggtggaggtggtggtaattgcaagccaaattcaaactggagcaaacctcaa
gaaaaactcccagtgcatgtggaagatgctctttcttatttggaccaagtaaaaatccgt
tttggaagtgatccagctacttatagtggattcttggagattatgaaagaattcaaatct
cagagcattgacactcctggagttatccgcagggtctctcagctgttccacgagcatcca
gacctgatgcttggatttaatgcctttctgccacttggttacaaaattgaacttccaaaa
aatggcaaagtggttgttcagacatccctggctagccctgtgtcatcagatgcaaccact
agctctttgtctagcagtcgtgtaatagtgcccccagttcctgaaaatgtactcagtgag
gtgcctgaggagtctcgtcagcaggaaaaggagaagcctcagccccctccagaatctgac
tcactggagtttcacaatgctattagctatgtgaataaaataaaaactcggtttttggac
cggcctgaaatctacagatctttcctagaaatcctccacacataccagaaggatcaactg
aatcccaaaggtcgccctttccgaggtatgtcagaggaggaggtgtttacagaggttgca
agtctgtttcgtggacaggaagatctgttgtctgaatttggccagttccttccagaggca
aagagatccctgttcacaggaaatggtgcttgtgatcttagttcaaggaaacttgagtac
cagcggaacctagaacaaagccgtaagaggtctagaccccttctattgcgttccatgcct
tcctccaagaagaagatgaagatgcgaaagtccaaggatcagtctatggctagtgtaggg
aagtatggcactctgcaggagttctcattcttcaataaggtccgccgagttcttaagagc
caagaagtctatgaaaactttctccgttgtatcgcacttttcaaccaggaattggtttct
ggttctgagcttctgcaactggtcacaccatttctaggaaagtttcctgaactctttgca
cagttcaagtctttcttgggtgttaaagagctttcgtttgcttcaccagtaacaaacgac
cgctccaatgagggcattgggcgggagatcgattatgcatcctgcaagcgcattggctcc
agttaccgtgctctacccaaatcttttccacacccaaaatgcagtgggaggactgcactc
tgcaaggaggtattaaatgacacctgggtgtcatttccttcgtggtctgaagattctact
tttgtgagttccaaaaagactccatatgaggagcagcttcaccgctgtgaagatgagagg
tttgagctggatgttgttttggaaaccaatttggctaccattcgtgtgcttgaaagtgtc
caaaagaaactctcccgcatgtctcctgaagatcaggaaaagttcaggctagatgaccgc
ttgggaggcacttcagaggttatacaacgcagggcaatctacagaatatatggggacaaa
gctccagatattgtagagagtctaaagaaaaacccagttactgctgtacctgtagtatta
aagagactgaaagcaaaagaagaggagtggcgggaagcacagcggggctttaacaagata
tggcgagagcagtatgaaagggcatacttgaagtctttagaccaccaggctgtcaatttt
aagcagaatgacacaaaagccctgcgctccaaaagcttgcttaacgagatagaaagtgtc
tatgatgagcggcaggagcagcaaccagacggcaggacaacgacatccagtggaccccac
ttgatctacacttatgaggactggcaaattctggaagatgctgcagctctaataacgttc
tatgtgaatcggcaaccaaccatccagaaggaagacaaggacacaatttggcaggttctg
caccagttccttcctgagctgtttttctcatcatcatcatcatctccttcctgccaatcc
ttatttgctgcttctgcagatgagggtccaactgagactgtcacagaatcttctgtcact
gaactgccagaacgccgaaggaagactgtgactactgaagtagcccaagagccccctccc
ccagtcgagacaccccatgaaccccctccaaagaccatagatgaagtttacagtttgttc
tacaccaacaacaactggtatttttttctgcggcttcaccatactctgtgctctcggctt
ctaaagatatatcgacaggcacagcaacagctgatggaataccggactgagaaagaaaga
gaaaaacgattatttgatggcaggagagaccgatcaaatggaccagccatggagctccgg
ctgaagcagcctagtgaagtggagttagaagaatattatcctgctttcctggacatggtg
agaaatctttttattggcaatctggatccaacacattatgaagacacgttgcgtgaaatg
ttcaccattcatgcttacattgttttcaccattgacaagctggttcaaaacattacacga
cagctccaccatctagtaagtgatgagatttgccttaaagtggtagagctgtacctgagt
gaaaagaagcgaggagctgctgggggtagccttgcttcacagtgtgtcagagctgccaag
gaagccagttaccaatggaaggctgaacactgtatgacagatgagaattgcttcaagatg
atgtttttgcagcgccagggtcaggtaacaatgactatcgagctgttagacacagaagat
gtgcagactgaagaccccacagaggttcagcatctagccaattatatggagcagttcatt
aatgtggatggagcccatagcagtcagagcgaaggctttgtcttaaaacctgtattgtta
cagagaaatatcagaagtttccatagctggcaatataggactatgagagttatgaaggat
gaagtgaagtcatcttggaagaagcttatgggagtagaaagcgctagtaacatggactgc
cgcttcaggctcaacagccacaaaatgatgtttattattaattcagaagactatatgtac
cgctggggaacactttccggagccagagaggtacagccacaagttttccaaagacaccat
gagaagttttctgaatggcacaaccgctggcttgaggaaaacgtcagtccaagagctgcg
caagtcatacaggattggcttacaggagaagaagatgaggagatggttccttgcaagacg
gtgtgtgagaactctgaagttcatggcatgagtgttacccgatatcgggtgcagtaccct
cgcagggctgcctctccctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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