KEGG   Xenopus tropicalis (tropical clawed frog): 779798
Entry
779798            CDS       T01011                                 
Symbol
lima1
Name
(RefSeq) LIM domain and actin-binding protein 1
  KO
K23026  LIM domain and actin-binding protein 1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xtr04812]
    779798 (lima1)
Cytoskeleton proteins [BR:xtr04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     779798 (lima1)
SSDB
Motif
Pfam: LIM SMP
Other DBs
NCBI-GeneID: 779798
NCBI-ProteinID: NP_001072345
Xenbase: XB-GENE-987339
UniProt: Q0IIZ0
Position
2:complement(148933150..148969066)
AA seq 715 aa
MDASPFRRGQWASQSVRVTARELSLVKPKNAAIMEIFSKYQKAAEESSFEKKRSNAENLP
PSFNRGSLSVLRKRWEIPGQAARTETIHNSGSQLRQKVSSPRGESTSPERSEVVSTKARS
PALHSNRFRYPSATEHSSNHNVGENMDQDLEIAKQDTPEPSPKVEKFNVPLNNLKMMFEK
GEVANKPQQEPGKIHVGRIISDKYVSSEDSDSCFTEKTPSLSSGSPDGSPSKLSSTRSLE
DSPILQATPLKDRMAKYQAALSKQNEVKNHSDHKENVPPSQLNNASSPDHEKILVNENSP
VISRNTSDNYEKYEEIQRSSSSPDYSPQSRVLNTMEPSPPKSVKKFQLPAREVCFSCQKT
VYPMERLFANNQVYHNGCFRCSHCSTKLSLGTFASLHGTVYCKPHFNQLFKSKGNYDEGF
GHKPHKELWVNKTETSETEESPEQTTAHISKDPSSPVVEEAPIAKVGVLAASMEAKNSSA
QDKEKQVETKRLKIAWPPPAESSGAGGSGEENIKVLRPKWPPVEEIQKVETEEDLDLKKL
RRSGSLRERSRAYILSVAKPVDSDKALDNLPASPPKLKKSNSFKLRDTWIKKPEERQSVE
EENKPSQDIKDVSVVAEDKEANPADLADKVLESEDVSKIEVAEQQHSPEESTETSHSSLE
DPVSPKNTSPEENRRSQDVGYWEGEEFEELSVEDQIKRNRYYDEDDEDVDGEEND
NT seq 2148 nt   +upstreamnt  +downstreamnt
atggatgcatctccctttagaaggggtcagtgggcctcccagtctgtcagagtcactgca
agggaactgtcccttgtgaaaccaaagaatgcagccattatggagattttttccaagtat
cagaaagctgctgaagagtcgagctttgaaaagaaaagatctaacgcagagaatctgccc
cccagttttaatcggggctctctcagtgtattaaggaagaggtgggagattcccggtcaa
gcagctcggactgaaactatccataacagcggctcccagctgaggcagaaggtcagcagc
cctaggggtgagagtacttccccagaacggtctgaagtggtcagcaccaaggctcgctcc
cctgcgctgcacagcaatcgcttccgctatcccagtgccaccgagcacagctccaaccac
aacgtgggggaaaacatggaccaagacttagagattgcaaagcaggacacccctgagcct
tctcccaaggttgaaaagtttaatgtgccattgaacaacttgaagatgatgtttgaaaaa
ggtgaagttgccaacaagccccaacaagaacctgggaaaatccatgtcggaagaattatt
tcagacaagtatgtctcctctgaagactcggatagctgcttcactgagaagactccttct
ttatcttccggctctcctgatggctctccaagcaaactttcctctactagaagcctggaa
gactctcctattctgcaggccactccactgaaagacaggatggccaagtatcaggcagct
ctttccaaacagaatgaggtgaaaaatcattctgaccataaagaaaatgtccccccaagc
caactgaacaatgcctcgtctcctgaccatgaaaagatacttgtgaatgagaacagcccc
gtcatttccaggaacacctcggataactatgaaaaatatgaagagattcagaggtccagc
agctctcctgactacagtccccaatcaagagtgctaaatacaatggagccttcacctccc
aaatctgtaaagaagttccagttgccggccagagaggtctgctttagctgtcagaaaacg
gtctacccgatggaacgactctttgccaataatcaagtgtaccacaacggctgctttcgt
tgctctcattgttcgaccaagctcagtcttggaacttttgcatcactccatggtactgtt
tactgcaaaccccactttaaccagctgttcaaatccaaagggaattatgatgaaggtttt
gggcacaaaccacacaaagaactttgggtgaacaaaacagagaccagtgaaacggaagag
agcccagagcagacgactgctcatatttctaaggatcccagcagcccagttgtggaagaa
gctcccatagcaaaggtgggagtcctagctgcatccatggaagctaaaaatagtagcgca
caagataaggagaagcaagtggagactaaaaggctgaagattgcctggcctcccccagct
gaatccagtggtgctggtggttctggggaagagaatatcaaagtgcttaggccaaagtgg
ccaccagttgaagaaattcaaaaagtagaaacagaagaggacttagacctgaaaaagctc
aggagaagtggatcacttagagagcgcagccgagcttatatattatctgtggctaagcct
gtggatagtgacaaagccctggataacttgcctgcatcacccccaaagttgaaaaagtca
aattcctttaaactacgggatacctggataaagaagccagaagaaagacagtcagtggaa
gaagagaacaagccctctcaagatattaaagatgtttctgtagtggctgaggacaaagag
gcgaatcctgctgacctggctgataaagtcttagagagtgaggatgtttctaaaattgag
gttgccgaacagcaacactcccccgaagagtccactgaaacgagccactcaagcctggaa
gatccagtaagccctaagaatacctcccctgaggagaaccgtaggtcccaagatgttggc
tactgggagggagaagaatttgaagagctttcagtggaagatcagatcaaaaggaatcgg
tactatgatgaggatgatgaagatgtagatggagaggagaatgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (44)   

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