KEGG   Xenopus tropicalis (tropical clawed frog): 780007
Entry
780007            CDS       T01011                                 
Symbol
bgn
Name
(RefSeq) biglycan precursor
  KO
K08118  biglycan
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    780007 (bgn)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:xtr00535]
    780007 (bgn)
Proteoglycans [BR:xtr00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class I
    780007 (bgn)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRRNT LRR_9 UAE_UbL Viral_env_E26
Other DBs
NCBI-GeneID: 780007
NCBI-ProteinID: NP_001072552
Xenbase: XB-GENE-1003139
UniProt: Q0P4I3
Position
8:23170619..23220318
AA seq 369 aa
MKALLMLCSCILVIHALPFEQRGFWDFTMDDGMAMMKDEEASGVDPTDTVPDVGSTPMPP
MDLCPFGCQCHLRVVQCSDLGLTSVPKNLPKDTTLLDLQNNKITEIKKEDFKGLTNLYAL
VIVNNKISKVNDKAFEPMQKMQKLYISKNNLEEIPKNLPKSLVELRIHENKIKKVPKNVF
SGLTNMNCIEMGGNPLENGGIEAGAFDGLKLNYLRISEAKLSGIPKGLPSSLNELHLDNN
KIQAIEKEDLSQYTNLYRLGLGHNNIRMIENGSLSFMPVLRELHLDNNKLSKVPPGLPDM
KLLQVVYLHSNNITQVGVNDFCPVGFGVKRTYYNGISLFNNPVPYWEVQPATFRCVTDRL
AIQFGNYRK
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgaaggcgttgcttatgttatgctcctgtatcttagtcatccacgccctgccgtttgag
cagaggggattctgggattttaccatggacgatggaatggctatgatgaaagatgaggag
gcctcgggagtagatcctactgacactgttccagatgttggctcgacgcctatgccacct
atggatttatgtccttttgggtgtcagtgtcatttacgtgtggtgcagtgctctgatttg
ggtctcacgtctgtgcccaagaaccttccgaaagacaccactctcttggatttacagaac
aacaaaattacagaaatcaaaaaggaagacttcaagggactgaccaacctgtatgctcta
gtaatagtaaacaataagatatcgaaagtcaacgacaaggcctttgagcccatgcagaag
atgcagaaactgtacatctctaaaaacaacctggaggaaatacccaaaaatcttcccaaa
tctctggtggagctgcgcattcacgaaaacaaaatcaagaaggtccccaagaatgtcttc
agtggactgaccaacatgaactgtattgaaatgggaggtaaccctttggaaaatggaggc
atcgaggctggcgcatttgatggcttgaagctgaactacttgcgtatttcagaggctaaa
ctgtctggcatcccaaaaggtcttcccagcagcctgaatgagcttcaccttgacaacaat
aagatccaagcaattgaaaaggaagaccttagccagtatacaaacctgtacaggctgggt
ttaggacacaataacatccgcatgatagaaaatggcagcctgtcttttatgcctgttctg
agagagcttcacttggacaacaacaaactctccaaagtgcccccaggcctaccagatatg
aagttactgcaggttgtctaccttcactccaacaacatcacccaggttggcgtcaatgat
ttctgccctgtaggatttggagtgaaacgtacctactacaatggaattagtctatttaac
aacccggttccctactgggaagtgcaaccagctactttccgctgcgtcactgaccgtttg
gctatccagtttggcaattacaggaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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