KEGG   Xenopus tropicalis (tropical clawed frog): 780116
Entry
780116            CDS       T01011                                 
Symbol
sec23a
Name
(RefSeq) protein transport protein Sec23A
  KO
K14006  protein transport protein SEC23
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    780116 (sec23a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    780116 (sec23a)
Membrane trafficking [BR:xtr04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    780116 (sec23a)
SSDB
Motif
Pfam: Sec23_trunk Sec23_helical Sec23_BS Gelsolin zf-Sec23_Sec24 APP_E2
Other DBs
NCBI-GeneID: 780116
NCBI-ProteinID: NP_001072659
Xenbase: XB-GENE-999781
UniProt: Q05AS9
Position
8:114065894..114122368
AA seq 765 aa
MTTFLEFIQQNEDRDGVRFSWNVWPSSRLEATRMVVPVAALLTPLKERPDLPPIQYEPVL
CSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISEMNQPAELLPQFSSIEYV
VQRGPQMPLIFLYVVDTCMEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVHVHELGC
EGISKSYVFRGNKDLTGKQIQEMLSLTKSPAAQQGRGPQVQQPPPSNRFLQPVQNIDMNL
TDLLGELQRDPWPVPQGKRPLRSSGAALSIAVGLLECTFPNTGARIMMFIGGPATQGPGM
VVGDELKTPIRSWHDIEKDNAKYVKKATKHYEALAHRAAASGHVIDIYACALDQTGLLEM
KCCPNNTGGYMVMGDSFNTSLFKQTFQRVFTKDAQSNFKMAFGGTLEIKTSRELKISGAI
GPCVSLNAKGPCVSENEIGTGGTCQWKICGINPFTTLAVYFEVVNQHNAPIPQGGRGAIQ
FVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAVYRAETEEGP
DVLRWLDRQLIRLCQKFGEYHKDDPVSFKFSETFSLYPQFMFHLRRSPFLQVFNNSPDES
SYYRHHFMRQDLTQSLIMVQPILYAYSFNGPPEPVLLDSSSILPDRILLMDTFFQILIYL
GETIAQWKKAGYQDMPEYENFRHLLQAPVDDGQEILQSRFPMPRYIDTEHGGSQARFLLS
KVNPSQTHNNMYGWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgaccacctttctggaatttattcagcaaaatgaagacagagatggggttcgcttcagc
tggaatgtgtggccatcaagccgcctggaagccacaaggatggtggttcctgtagctgct
ctcttgacaccgctaaaagagcgaccagacttgccccctatacagtatgaacctgttttg
tgcagcaggactacatgcagagctgtactcaatcctttatgtcaagtggattatcgagca
aaactttgggcatgcaacttctgttaccaacgaaatcagtttccccctacatatgcaggc
atctcagaaatgaatcaacctgcagagcttctgcctcagttttctagtattgagtatgtg
gttcagcgtggacctcagatgccactgatctttctgtatgttgtggacacttgcatggaa
gatgaagatcttcaagctcttaaggagtccatgcaaatgtccctcagtctgctgcctcct
acagcactcgtggggctgataacatttggacggatggttcacgtacatgaactgggatgt
gaaggcatctcgaagagctatgtttttagaggaaataaagaccttactggaaagcaaatc
caggaaatgttatctcttacaaaatctccagcagcccaacaaggccgtgggccacaagtt
caacaaccccctccatccaacagatttttacaaccagtgcagaacatcgacatgaatctc
actgaccttctaggagagctgcaaagggatccatggccagttcctcaaggcaagaggcct
ctcagatcatctggagctgccctctccatagcagttggacttcttgagtgcacattcccc
aacactggcgcacgcataatgatgtttatcggggggccagccactcagggtccagggatg
gtggtgggtgatgagctaaagacccctatccgttcatggcatgatattgaaaaggacaat
gccaagtacgtcaaaaaggcaaccaaacattatgaagcccttgcacaccgtgctgctgcc
tctggccacgtcattgatatttatgcctgtgcattggatcagactgggctgctggaaatg
aaatgctgtccgaacaatacaggaggatacatggtgatgggtgattcctttaatacatct
ctcttcaaacaaaccttccaaagagtttttaccaaagatgcacagagcaatttcaagatg
gcatttggtggaaccctagaaatcaagacttcaagagagttaaagatatctggtgccatc
gggccatgtgtatccctgaatgccaaaggcccatgtgtgtctgaaaatgagattggtaca
ggcggcacctgccagtggaaaatctgtggcattaaccctttcacgacactggcagtttac
tttgaagttgtcaatcagcacaatgctccaattccccagggtggtcgtggggcaatccag
tttgtcacacagtatcagcactccagtggccagagaaggatccgtgtaaccacaatcgcc
agaaactgggctgatgctcagacacagatccaaaacattgcagcttcatttgatcaagag
gcagcagctatacttatggctaggcttgctgtgtacagggcagagacagaggaaggtcct
gatgtcttgcgatggctggacaggcagctcattcgattgtgtcaaaagtttggagaatac
cacaaagatgaccccgtctctttcaaattttctgagactttctctctctacccacagttt
atgttccacttgaggagatctccattccttcaggtgtttaataatagtccagatgagagc
tcctattacaggcatcacttcatgcggcaagacctcactcagtccctaataatggttcag
cccatcctgtatgcctattcctttaacggacccccagagcccgtgttgcttgacagtagc
agcattcttccagataggattcttctgatggacacttttttccaaattctgatctatctt
ggagagactatagcacagtggaagaaagcaggctaccaagacatgccagaatatgaaaac
ttccgacacctgcttcaagctcctgttgacgatgggcaggagatccttcagtcccgtttc
cccatgccacgatacatagacacagaacatggaggaagtcaggctcgcttcctgctatct
aaagtcaacccgtcccagactcataacaacatgtacggctgggggcaggaatccggagct
cccattctcaccgatgatgtcagcctgcaggtttttatggatcatctaaagaaactagcc
gtgtccagtgctgcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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