KEGG   Xenopus tropicalis (tropical clawed frog): 780297
Entry
780297            CDS       T01011                                 
Symbol
cul5
Name
(RefSeq) cullin-5
  KO
K10612  cullin 5
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    780297 (cul5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    780297 (cul5)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    780297 (cul5)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul5 complex
    Cullin
     780297 (cul5)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     780297 (cul5)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 TFC3_eWH HMD
Other DBs
NCBI-GeneID: 780297
NCBI-ProteinID: NP_001072836
Xenbase: XB-GENE-484069
UniProt: Q0D2D8
Position
2:complement(159943983..159972314)
AA seq 780 aa
MATSNLLKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKSNVEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKE
EENRALRYLETRRECNSVQALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLM
DKVPNGIEPMLKDLEEHIVSAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTP
LSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQL
AVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLSYEPTVNSPKDF
TEGTLFSVNQEFSLIKNGKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDESDINTFIYMA
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttgttaaagaataaaggttcccttcaatttgaggacaaatgggac
tttatgagacctatagttctgaaacttttacgccaggaatccgtcacaaaacagcaatgg
ttcgatttgttctcagatgtacatgcagtttgcctatgggatgacaagggccctgcaaaa
attcatcaggctttaaaagaagacatccttgattttataaagcaagctcaggctagggta
ctaagccatcaagatgacactgcattacttaaagcttacattgtagagtggcgcaagttc
ttcacgcaatgtgacatcttaccaaagcctttttgtcaactagaaatcactttaatggga
aagcaaggcagcaacaaaaaatccaacgtagaagatagtattgtacgaaagctgatgctg
gacacatggaatgaatctattttttctaatataaaaaatcgacttcaggatagcgcaatg
aaattggtccatgccgagcgactaggagaggcttttgattctcaacttgtaataggagtg
agggagtcatatgttaatttatgttctaatccggaagacaaactccagatctacagggat
aatttcgaaaaagcctacttggattcaacagagcgtttctaccgcacacaggccccttcc
tatttgcagcagaatggggtacagaactatatgaaatatgcagacgctaaactaaaggaa
gaagagaacagagcgctccgttatctagagacacgacgggaatgtaactctgtgcaggca
ttaatggaatgttgtgtaaatgctcttgtgacgtccttcaaagagacaattttagctgaa
tgtcaaggcatgatcaagcgcaatgaaacggaaaagctgcatttaatgttttcccttatg
gataaagtccctaatggaatagaacccatgttaaaagatctagaagagcacattgtaagt
gctggcttggctgacatggtggctgctgcagaaaccattactactgattctgaaaaatat
gttgaacaattactgaccctgtttaatagatttagtaaactagtaaaagaagccttccag
gacgatccacggtttctcactgcacgagataaggcatacaaagctgttgtaaatgatgca
acaatatttaaacttgaattgccactaaagcagaaaggggtgggtctgaaaacacagccg
gagtccaagtgcccagagttgctcgctaactattgtgatatgttgttacggaaaacgcca
ctcagtaagaaactgacttctgaggaaatcgaggcaaagttgaaggaagtgctgttggtg
ctaaaatatgtgcagaacaaggatgtgttcatgaggtaccacaaggctcacctgacacgc
cgcctcattttagatatctccgccgacagtgaaatagaagaaaacatggtggagtggctc
agggaggtgggcatgccagctgattatgtaaataaactagccagaatgttccaggacatc
aaagtatcagaagacttaaaccaggctttcaaagaaatgcataaaaataataaattagcc
ctgccagctgactctgtgaatattaaaattttgaatgccggtgcttggtcacggagctcg
gaaaaggtatttgtgtcccttcccactgagctcgaggacctcattcctgaagtagaggag
ttttacaagaaaaaccacagcggcagaaagcttcactggcaccatcttatgtccaatggc
attataacatttaagaatgaggttggccagtacgacttggaagttaccactttccagctg
gcagttctgtttgcttggaaccaaaggccgagagaaaaaatcagctttgaaaatcttaaa
ctggcaacagagttacctgatgctgagcttaggagaactctgtggtctcttgtagcattt
ccaaagctgaaacgccaagtattatcctatgaaccgacggtaaattccccaaaagacttc
acagagggtaccctcttctctgtaaatcaggagttcagcctaataaaaaatggaaaggtt
cagaaacggggtaagatcaacttaatcggccgcttgcagctgaccacggaaaggatgcga
gaagaagagaatgaaggcattgtgcagctaaggatattaaggacacaggaggctattatt
caaatcatgaagatgaggaagaaaattactaacgcccagctccagactgaacttgtagaa
attttaaaaaacatgtttttgccacagaagaaaatgataaaagagcaaattgaatggctc
atagaacacaagtacatcaagagagacgaatccgacattaacaccttcatatacatggcg
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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