KEGG   Xenopus tropicalis (tropical clawed frog): 780363
Entry
780363            CDS       T01011                                 
Symbol
bnip1
Name
(RefSeq) vesicle transport protein SEC20
  KO
K08497  protein transport protein SEC20
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    780363 (bnip1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    780363 (bnip1)
Membrane trafficking [BR:xtr04131]
 SNARE
  SNAP-25[N] (Qb)
   Sec20
    780363 (bnip1)
SSDB
Motif
Pfam: Sec20 DUF2777
Other DBs
NCBI-GeneID: 780363
NCBI-ProteinID: NP_001072901
Xenbase: XB-GENE-977996
UniProt: Q0IIZ1
Position
3:complement(43439035..43447130)
AA seq 227 aa
MADSQDVHVRICHQEIVKYDLEIKALIQDIRECPGPLSTLNDFNAQVKEKFHLLRLRIQD
FEQLAKEQDKESDKQALLKEMECHKKQMLSNQTVWRKANLSCKQAIDNAEKDELLDGGDP
TRQRKVAKENLAQSTSNITESLMGISRMMAQQVGQSEVTMQTLATSSRTIQEANEEFKSM
SGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYILKKRLLPF
NT seq 684 nt   +upstreamnt  +downstreamnt
atggcagattcgcaggatgtccacgtccgaatttgtcaccaggaaatcgttaaatatgac
ctggagatcaaagcgctgatccaggacatcagagaatgccctggtcctctaagcacacta
aatgatttcaatgctcaagtcaaggaaaaattccacctgctgaggctgagaatacaggat
tttgaacagttggctaaggagcaggataaggaatctgacaagcaagcattgctgaaggag
atggagtgccacaagaaacagatgttaagcaaccagactgtgtggcgaaaggcaaacctt
tcatgcaagcaagcaatagataatgcagagaaggatgaactgctcgatggaggagaccct
acaaggcagagaaaagtagcaaaggaaaacctggcacagtcgacgagcaacatcaccgag
agcctgatgggtatcagtcgaatgatggcacagcaagtggggcagagtgaagtaaccatg
cagacactagccacgtcatcacggaccatccaggaagccaatgaagagttcaaatccatg
tcagggactatacaacttgggcgtaaacttatcactaagtacaaccggcgtgagctcact
gacaagctgctcatttttctggccttggccttattcttagcaactgtactgtacatcttg
aaaaaaaggctgcttccattctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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