KEGG   Xenopus tropicalis (tropical clawed frog): 407885
Entry
407885            CDS       T01011                                 
Symbol
elp3
Name
(RefSeq) elongator complex protein 3
  KO
K07739  elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xtr03016]
    407885 (elp3)
Enzymes [BR:xtr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.311  tRNA carboxymethyluridine synthase
     407885 (elp3)
Transfer RNA biogenesis [BR:xtr03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    407885 (elp3)
SSDB
Motif
Pfam: Radical_SAM_C Radical_SAM Acetyltransf_10 Acetyltransf_7 Acetyltransf_1 FR47
Other DBs
NCBI-GeneID: 407885
NCBI-ProteinID: NP_001001215
Xenbase: XB-GENE-957348
UniProt: Q6NVL5
Position
5:152200080..152276231
AA seq 549 aa
MKPDRGPRGKQSQAELMMMTVADVIKQLVEAHEQGKDVNLNKLKTKTSAKYGLSAQPRLV
DIIAAVPPQYRKILVPKLKAKPIRTASGIAVVAVMCKPHRCPHINFTGNICVYCPGGPDS
DFEYSTQSYTGYEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALS
EDYRDFFIRNLHDALSGHTSNSVSEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLSY
GCTRLEIGVQSVYEDVARDTNRGHTVKAVCESFHMAKDAGFKVVSHMMPDLPNVGLERDT
EQFIEFFENPAFRPDGMKLYPTLVIRGTGLYELWKTGRYRSYSPSTLVDLVARILALVPP
WTRVYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTECRDVRTREVGIQEIHHKVRPY
QVELIRRDYVANGGWETFLSYEDPEQDILIGLLRLRKCSEQSFRPELKGGVSIVRELHVY
GSVVPISSRDPSKFQHQGFGMLLMEEAERIAREEHGSCKIAVISGVGTRNYYRKLGYELE
GPYMVKKLD
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgaagccggacagggggccgagggggaagcagagccaggccgagctgatgatgatgacg
gtcgctgatgtaattaagcagcttgtggaggctcatgagcagggaaaggacgtcaatctg
aacaagttgaaaacgaaaacttcggccaagtacggactgtctgcgcagccgcgcctggtg
gatatcattgccgccgtccccccccagtaccggaaaatcctggtgcccaagctaaaagca
aagcccatccgaactgctagcgggattgccgtggtcgctgttatgtgcaaaccccacaga
tgcccccatattaactttactggcaacatctgcgtgtactgccccggaggaccagattct
gattttgaatactcgacacagtcatacactggatacgagccaacatcaatgagagccatc
cgtgcccggtacgacccgtatctacagaccaggcatcgggtagagcagctaaagcaattg
ggccacagcgtcgacaaggtggagtttatcgttatgggcggaaccttcatggccctatcg
gaggattacagagacttcttcatccggaatctgcacgatgccttgtctggccatacgtcc
aacagcgtctcggaggccgtacgatattctgaaaggagcaatactaagtgtgtgggcatc
accattgaaaccaggccagattattgcctgaagcgccatctgagcgacatgttgtcctac
ggttgcaccaggcttgagattggggtgcaaagtgtgtatgaagatgtggccagagacaca
aacagggggcacacagtgaaggccgtatgcgagtcctttcacatggctaaagacgccggc
tttaaggtggtctcgcacatgatgccggatctgcccaacgtgggactggagagagacact
gagcagtttattgagttctttgaaaaccctgctttccgcccggatgggatgaagctgtat
ccaacgttggtgatccgtggcaccggtctgtatgagctgtggaaaactggacgatacaga
agttattccccaagcaccctggtggatttggtggcgaggattttggcccttgtgcctcca
tggacacgggtttacagagtgcagagggatataccgatgccactagtaagctctggggtg
gaacatggcaacctgagggaattggcattagccagaatgaaagatttgggcactgagtgc
cgagacgtaagaacgcgagaggtgggaattcaagaaattcatcacaaagtcagaccttat
caggttgagctaattcgcagagattacgtcgctaacggtgggtgggagacatttttatcc
tacgaagatcccgagcaagacatacttatcggcctcctgcgcctacggaaatgttccgaa
cagtccttccggcccgagctcaaggggggcgtgtctattgtgcgggaactgcatgtttac
ggcagcgtggtcccaatcagcagccgcgacccttccaagttccaacatcaggggtttgga
atgctgctgatggaggaagcagagcgaatagcaagggaggaacatggttcctgcaaaatt
gccgttatttcaggtgttgggacaaggaactattacagaaaacttggctatgaattagaa
gggccgtacatggtgaagaagctggactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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