KEGG   Xenopus tropicalis (tropical clawed frog): 100145809
Entry
100145809         CDS       T01011                                 
Symbol
papola
Name
(RefSeq) poly(A) polymerase alpha
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100145809 (papola)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    100145809 (papola)
Enzymes [BR:xtr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     100145809 (papola)
Messenger RNA biogenesis [BR:xtr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     100145809 (papola)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 Polbeta DUF6431
Other DBs
NCBI-GeneID: 100145809
NCBI-ProteinID: NP_001136382
Xenbase: XB-GENE-944351
UniProt: B5DEV0
Position
8:89190083..89220783
AA seq 732 aa
MPFPLANQGSQQSQKTYGITSPISLATPKDTDCTLTQKLIETLKPFGVFEEEEELQHRIL
ILGKLNNLVKEWIREISELKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRH
VDRSDFFSSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLD
LRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGF
LGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR
VNPSDRYHLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFD
APNFFQKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPA
PSENTEKEEFRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDTVYRQAINSKMFENEMKI
AAMHVKRKQLHQLLPSHVLPKKKKHSVEGVKLVSLNDSSIDLSVDSDNSMSVPSPTNATR
TSPLNCSGLIQGRNSPATPVSFSVTNTQAADVMAPQNNSTENLGGSLNESIPETATHPAF
SSTPRTLVTRVVSSMRLVNQVQKPVANTVTKLPSPVAGVKRTSSPSNEESPKKTKTEEDE
NDSSNSTEVDEQNKLETEELKEVLSEAKSSSPVPGELPSSQRSSSTDLSDISVLPATPIP
VIKNSIKLRLNR
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgccgtttcctcttgcaaaccagggatcacagcagtcacagaaaacttatggcattact
tcacctattagtttagccacaccgaaagatactgattgtaccctcacgcaaaaactaatt
gaaactttaaaaccttttggagttttcgaagaagaagaagagttacaacatagaatttta
attttggggaaattaaacaacttagtaaaggaatggattcgggaaatcagtgagctcaag
aatcttccacagtctgtaatagaaaatgtaggtggaaagatttttaccttcggatcgtac
agattaggtgttcatactaaaggtgctgatattgatgctctctgtgttgcaccaaggcat
gttgatagaagtgactttttttcctctttttatgaaaagttgaagcagcaggaagaagtc
aaagatttgagatctgttgaagaagcatttgtaccagtcattaaattgtgctttgacggg
atagagattgatatcctgtttgcaagacttgcactgcagacaatacctgaggatttagac
ctccgagatgacagcctgctgaaaaatttagacatacgatgtatacgtagtctaaatggt
tgtagagtgactgatgaaattcttcatttagtaccaaacatagacaacttcaggttaact
ctcagagcaatcaaattatgggccaaacgtcacaacatctactcaaacatacttggtttt
cttggcggtgtttcatgggctatgttggtagcaagaacgtgccagctgtatccaaatgca
attgcatcaactcttgttcataaatttttcctagtgttttctaaatgggaatggcctaat
cctgtactacttaagcaaccagaagagtgcaatctgaatttgcctgtctgggatcctagg
gtgaatcccagtgatcgatatcaccttatgcctattatcacaccagcctaccctcagcaa
aattctacctacaatgtgtctgtatcaactcgcgcagttatggttgaagagttcaaacaa
ggcctggccattacagatgaaatcttgcttggtaaagcagagtggtccaaactttttgat
gctcccaacttctttcagaagtacaagcattatattctacttcttgcaagtgcaccaaca
gaaaagcagcggctggaatgggtaggcttggtagaatcaaaaattcgtattcttgttgga
agtttagagaagaatgaattcattacactggctcatgttaaccctcagtcatttccggca
ccttccgagaacacggaaaaggaagaattccgtacaatgtgggtcatagggctggtgttt
aagaaaatggaaaattcagaaaacttgagtgttgacctaacttatgacattcagtctttc
actgacacagtgtaccggcaggccattaacagcaaaatgtttgaaaatgaaatgaaaatt
gctgcaatgcatgtcaagaggaagcaacttcatcaactgcttccaagtcatgtgctcccc
aaaaagaaaaagcattcggttgaaggtgttaaactggtatctttgaatgacagcagcatt
gatttatcagtggacagtgataacagcatgtctgtgccttctcctaccaatgccacaaga
acaagtccactaaattgttctggattaattcaaggcagaaacagcccagcaacaccagta
tccttttctgtgaccaacacccaggctgctgatgtaatggcgccacagaataattccact
gaaaatttagggggtagtttaaatgaaagcattcctgaaactgccacacacccagcattt
tcttctactccaagaactttagtgacccgagttgtttcttctatgcgtttggtgaaccaa
gtgcaaaagcctgtcgcaaatacagtgacaaaattgcctagtccagtagcaggtgtgaaa
aggacatcatctccttcaaatgaagagagccctaaaaaaaccaaaacagaggaggatgaa
aatgatagcagtaattccacagaggtagatgaacagaataaattagaaactgaagaacta
aaggaagtactaagtgaagcaaaatcctcttctcctgttccaggtgaactgccatcctct
cagcgatcatcaagtacagatctgtctgatatttctgtgctccctgctactcctattcct
gttatcaagaattcaataaagttaagactgaaccgataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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