KEGG   Yersinia aleksiciae: ACZ76_10055
Entry
ACZ76_10055       CDS       T03994                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
yak  Yersinia aleksiciae
Pathway
yak03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:yak00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACZ76_10055 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yak03021]
    ACZ76_10055 (rho)
   03019 Messenger RNA biogenesis [BR:yak03019]
    ACZ76_10055 (rho)
Transcription machinery [BR:yak03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ACZ76_10055 (rho)
Messenger RNA biogenesis [BR:yak03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ACZ76_10055 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_25 AAA_22 AAA FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: AKP33861
UniProt: A0A0T9ULD9
Position
2233570..2234829
AA seq 419 aa
MNLTELKNTPVSDLITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVAGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIATSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDF
NRSGTRKEELLTTTEELQKMWILRRILHPMGEIDAMEFLISKLATAKTNDQFFDNMRRS
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatcttaccgaattaaagaacacgccggtttctgatctgataacacttggcgaaaat
atggggctggaaaacctggcccggatgcgtaaacaagatattattttctctattcttaag
cagcacgcgaaaagtggagaagatatcttcggtgacggtgtattggagatattgcaggat
ggatttggtttcctccgctctgctgacagctcctacctcgccggtcctgacgacatctat
gtatccccaagccaaattcgccgtttcaacctccgtactggtgataccgttgccggtaag
attcgtccgcctaaagaaggtgagcgttattttgcattgttgaaagttaacgaagttaac
tatgacaaaccggagaacgcccgtaataaaatcctgttcgaaaacttaaccccattacat
gccaactctcgtctgcgcatggaacgtggtaatggttcgacagaagatttaactgcccgt
gtcctggatttggcatcgccaatcggtcgcggtcaacgtggtctgattgtggcaccgcct
aaagcgggtaaaaccatgctgttgcagaacatcgcaaccagcatcgcttacaaccaccct
gattgcgtattgatggtcttgctgattgatgagcgtccggaagaagtgaccgagatgcaa
cgtctggttaaaggcgaagtgattgcttctacctttgatgaacctgcatcccgtcacgtt
caagttgctgaaatggtcattgaaaaagcaaaacgtctggttgagcacaaaaaagacgtt
atcattttgctggactccattacccgtttagcccgtgcctataacaccgtggtacctgcc
tcaggcaaagtactgaccggtggtgtggatgcgaatgccttacatcgtccaaaacgtttc
tttggtgctgcacgtaatgttgaagagggcggaagcctgactatcattgctaccgcgttg
gttgataccggttctaaaatggatgaagttatctatgaagaatttaaaggtaccggcaac
atggaattgcacctgtcccgcaaaattgcggaaaaacgtgtcttcccagccattgatttc
aaccgctcagggacacgtaaagaagagctgttgacaaccactgaagagctgcaaaaaatg
tggatcttgcgccgtatccttcatccaatgggtgaaatcgatgcgatggagttcctcatc
agcaagctggcaacagcaaaaacaaacgatcagttcttcgataatatgagacgttcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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