KEGG   Yersinia aldovae: AT01_1473
Entry
AT01_1473         CDS       T03605                                 
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
yal  Yersinia aldovae
Pathway
yal03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:yal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AT01_1473 (xseB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yal03400]
    AT01_1473 (xseB)
Enzymes [BR:yal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     AT01_1473 (xseB)
DNA repair and recombination proteins [BR:yal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     AT01_1473 (xseB)
SSDB
Motif
Pfam: Exonuc_VII_S
Other DBs
NCBI-ProteinID: AJJ63133
Position
1554943..1555197
AA seq 84 aa
MPKKAVSPETKAASFETSLNELEQIVTRLESGELPLEEALNEFERGVQLARIGQQTLLQA
EQRVQILLSDDATAPLSSFTPDAE
NT seq 255 nt   +upstreamnt  +downstreamnt
atgccgaaaaaagccgtatcacctgaaaccaaagctgccagttttgaaacatcgctcaac
gagctggagcagattgtgacccgcctggaatccggtgaattaccgctggaagaggcgtta
aacgaattcgaacggggtgtgcaactggcacgtatcgggcaacaaaccctgctacaagct
gaacagcgggtgcagatcctccttagcgacgacgccactgcgccgctttcatcgttcacc
ccggatgccgagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system