KEGG T03605: AT01

Yersinia aldovae: AT01_1872

Entry

AT01_1872         CDS       T03605

Symbol

clpV

Name

(GenBank) type VI secretion ATPase, ClpV1 family

K11907

type VI secretion system protein VasG

Organism

yal Yersinia aldovae

Pathway

yal03070

Bacterial secretion system

Brite

KEGG Orthology (KO) [BR:yal00001]
09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AT01_1872 (clpV)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yal02044]
    AT01_1872 (clpV)
Secretion system [BR:yal02044]
Type VI secretion system
  Imp/Vas secretion system core components
   AT01_1872 (clpV)

SSDB

Motif

Pfam:

AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 AAA_7 NACHT bpMoxR RsgA_GTPase nSTAND3 Sigma54_activat AAA_24 Rad17 SLFN-g3_helicase

Other DBs

NCBI-ProteinID:

AJJ62198

Position

complement(1995094..1997697)

AA seq 867 aa
MIQIDLPTLVNRLNPIARHALEAAAAHCVNQQEAEVTVSQVLFQMIATPLCDVRLILNHA
GVEVDELRELLDQRVSGYQAITQAYPSFSPLLVEWLQDSWLLASTEMEHSQLRSGVMLLT
LLLSPLRYLIPTASRLLSPVNRELLRQNFSDWTADSAEAPQREKGADASSSTAINGESLL
ARYTSNMTEQARNGSLDPVLCRDEEIDLMIDILCRRRKNNPIVVGEAGVGKSALIEGLAL
RIVDNHVPEKLRNSELMTLDLGALQAGAAVKGEFEKRFKGIMAEIAQSTTPIILFIDEAH
TLIGAGNQQGGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVAEP
SAEEATIIMRGLRTVYEQAHGVLIDDEALQAAAMLSDRYISGRQLPDKAIDVLDTAAARV
AINLTSPPRQVSALKNQLHHQAMEIEILERELRLGLSCPDERLTVLKQQRMAIEQQLTEL
NASWEKQQDLVQQIIAQRAILLAQDALATDEQVVSLAALGDELAQLQQHQTLVSPHVDKT
QIAAVIAEWTGVPLNRLSQSELAVVTELPAYLGQQIKGQDLAIHCLHQHMLTARADLRRP
GRPMGAFLLVGPSGVGKTETVLQISELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYV
GYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRIIDCKNIVF
FLTSNLGYQTIVDNAENPALLNEQLYPELAEFFKPALLARMEVIPYLPLGKGTLQTIIHG
KLNRLDTLLRQRFNADVVIEPEVIDEILQRATRAENGARMLESIIDGALLPPVSLLLLQK
MAASVAISHIRIAVEGNVFTAQVEEAT

NT seq 2604 nt +upstreamnt +downstreamnt
atgattcaaattgacttgcccacactggtaaaccgccttaatcctatcgcccgccacgcg
ctggaagcggcggctgcacattgcgtcaatcagcaagaagctgaagttaccgtttctcag
gtcttgttccagatgatcgctacaccgctatgtgatgtcagattgatactgaatcatgct
ggggttgaagtggatgagctgcgagaactgctcgaccaacgcgtttcaggctaccaagct
atcactcaagcctatccgagcttttccccattattggtggagtggctacaggatagttgg
ttgctggcatcaaccgagatggaacatagccagttacgcagtggcgtgatgttactgaca
ttattgctcagtccactgcgctatctcatacccacggccagtcgattattatcgccggtt
aatcgtgagttattgcgccagaactttagcgactggacggcagattcggcagaagcacca
cagcgggaaaaaggtgcggatgcgagcagcagcacggcaattaatggtgaaagcctactc
gcacgctacaccagcaatatgactgaacaggcgcgtaatggctcgctggacccggtgttg
tgtcgcgatgaagagatcgatctgatgatcgatattctgtgtcgccgccgtaaaaacaac
ccgattgtggtgggggaggcaggtgtcggcaaaagtgcgttaatcgaaggtttagccctg
cgcatcgtggataaccatgtgccggaaaagctacgtaacagtgaattaatgacactggac
ttaggggcgcttcaggccggtgctgcggtgaaaggggagtttgaaaaacgcttcaaaggc
attatggcggaaatagcgcaatctactacaccgattattctgtttatagatgaagcacat
acgctgatcggcgcggggaatcagcaaggcgggttagacatttcaaatctgctcaaaccc
gctttagcgcggggtgagttaaaaaccatcgccgcaaccacctggagcgaatacaaaaaa
tattttgagaaagatgccgcgctgtcgcgtcgttttcagttggttaaagtcgccgaaccc
agtgcggaagaggcaacgattatcatgcgcggcctgcgcacggtatatgaacaagcgcac
ggcgtactgatcgatgatgaagcattgcaggcggcagccatgctcagtgatcgttatatt
tctggccgccaactgccagacaaagctatcgatgtactcgacaccgccgctgcgcgtgtc
gctattaacctcacttcacccccgcgtcaggtttcggcgctgaaaaaccagttgcaccat
caggcgatggaaatagagatactggagcgcgaattgcgcctgggcttaagctgcccggat
gagcgtttaaccgtactaaaacagcagcgcatggctattgaacagcagctcaccgaactg
aatgcgagctgggaaaaacaacaagacttggtgcagcagattatcgcacaacgcgcgatt
ctactggcacaagatgcgttggcaacggatgagcaagtggttagtctggccgcgctgggt
gatgagctggcacagttgcagcaacatcagacgctagtgtcgccacatgtggataaaact
cagattgcggcagttattgcagaatggaccggtgttccgttaaatcgcctttctcagagt
gagttggcggtcgttaccgagttgccagcttatctgggtcagcaaatcaaagggcaagat
ttggcaatccattgcctacaccaacacatgctgacggcaagggcagatttacgtcgcccc
ggccgaccgatgggcgctttcctgctagtggggccaagcggggtgggtaaaacagaaacg
gtattacagatttctgaattgctctacggtggccgccaatatctcaccaccatcaatatg
tctgaatttcaggaaaaacatacagtttcccgtctgattggttcgccaccgggctatgtc
gggtatggcgaagggggcgttttgacggaagctatccgtcagaagccctactcggtggta
ctacttgatgaagtagaaaaggcgcatccagatgtgctgaacctgttctatcaagccttt
gataaaggtgaactggctgatggcgaaggcagaatcattgattgtaagaatatcgtgttt
ttcctgacctccaatctgggctaccagaccattgttgataatgccgaaaaccccgcattg
ctgaatgagcaactttatcctgaattggctgaattctttaaacctgctctgctcgcccgg
atggaagttatcccttatttaccgcttggcaagggaacgctgcaaaccattatccacggc
aaactgaaccgtttggatacgctgttgcgccaacgttttaacgctgatgtggtgattgaa
cctgaggtaattgacgagatattacagcgtgccacccgagcggagaatggcgcacgtatg
cttgagtcaattattgatggtgcactgttgccgccagtttcgctgctgttattgcaaaaa
atggctgccagcgtcgctattagccatattcggattgcggttgaggggaatgtgtttacc
gcacaagtcgaggaagcgacatga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (23)   

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