KEGG   Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YE0562
Entry
YE0562            CDS       T00469                                 
Symbol
holD
Name
(GenBank) DNA polymerase III, psi subunit
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
yen  Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Pathway
yen03030  DNA replication
yen03430  Mismatch repair
yen03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YE0562 (holD)
   03430 Mismatch repair
    YE0562 (holD)
   03440 Homologous recombination
    YE0562 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yen03032]
    YE0562 (holD)
   03400 DNA repair and recombination proteins [BR:yen03400]
    YE0562 (holD)
Enzymes [BR:yen01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     YE0562 (holD)
DNA replication proteins [BR:yen03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     YE0562 (holD)
DNA repair and recombination proteins [BR:yen03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     YE0562 (holD)
SSDB
Motif
Pfam: DNA_III_psi
Other DBs
NCBI-ProteinID: CAL10680
UniProt: A1JJ90
Position
647457..647894
AA seq 145 aa
MASRRDLLLQQLGITQWTLRRPAVLQGEIAIRLPDDTRLLIVADPLPEQDDPLLCDVLRC
LGLNPHQAYALTPDQVAMLPEETQCNSWRLGISEPLAVAGAQLYSPALTGLYQDASAKRA
LWQQICHHEADFYPDASRSGHSVPN
NT seq 438 nt   +upstreamnt  +downstreamnt
atggcatcaagacgagacttactgttacaacagctgggtattacgcagtggacattgcgc
cgcccggccgttttgcaaggtgaaattgccatacgtttacccgacgatacccgcctgtta
attgtcgcagacccgcttcctgagcaggatgacccgttgttgtgtgatgtgttgcgctgc
cttgggctaaatccgcatcaggcctatgcgctgacgccggatcaggtggcaatgttaccc
gaagagacacagtgcaacagttggcgattgggcatcagtgaaccgcttgcggttgcgggt
gcgcagttatacagcccggccctgaccggactttatcaagacgcgagcgctaagcgcgca
ctttggcagcagatttgtcatcatgaagcagatttctatcctgacgccagccgatctggc
cacagcgtaccaaattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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