KEGG   Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C1917
Entry
YE105_C1917       CDS       T01480                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
yep  Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Brite
KEGG Orthology (KO) [BR:yep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:yep03016]
    YE105_C1917
Enzymes [BR:yep01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     YE105_C1917
Transfer RNA biogenesis [BR:yep03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    YE105_C1917
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: ADZ42413
Position
2222351..2223472
AA seq 373 aa
MNYQLITTDSALQQVCEQARTHAHVALDTEFVRTRTYYPQLGLIQLYDGEKLSLIDPLPI
TQWQPFRELLQDVSVVKYLHAGSEDLEVFLNAFELMPTPMIDTQVLAAFSGRSLSCGFAM
LVNELEGVELDKSESRTDWIARPLSEKQCDYAAADVFYLLPLASKLVEATEAAGRMDAAK
DECELLCRRRSETLDPELAYREITNAWQLRGHQLACLQKLASWRLRQARERDLAVNFVVR
EENLWQVARYQPTSLGELDSLGLSGQEIRYHGRTLLALVAEGNAVPEDQLPPPVINLIDQ
PGYKKVFKDIKALIVSVSERSGLSSELLASRRQINQLLSWHWKLKSTETQPELLSGWRGD
LLATELTEILQQY
NT seq 1122 nt   +upstreamnt  +downstreamnt
ttgaattatcagttgatcaccaccgacagtgccttacagcaggtctgcgaacaagcccga
acacatgcccatgtggcgctggacacagagtttgtcagaacccgcacctactatcctcag
ttgggcctgattcaactgtatgacggcgaaaaactttcactgattgaccctttgcccatt
acgcagtggcaacctttccgcgagttgctccaagatgtgagtgtggtgaagtatttgcat
gcgggtagtgaagatctcgaagtgttcttgaatgcgtttgaactcatgcccacgccgatg
attgatacccaagttttggccgccttttctggccgctcattatcttgcggctttgccatg
ctggtgaatgaacttgaaggtgttgaattagacaaaagcgaatctcgcacggattggatt
gctcgtcctctgagtgaaaaacagtgtgattatgcagctgctgacgtattttacctgtta
ccgttagccagcaaattagttgaagcgaccgaagcagcagggcgtatggacgccgctaaa
gatgaatgtgagctgttgtgtcgccgtcgcagtgaaacactcgatcccgaattagcctac
cgtgaaatcaccaatgcctggcagttgcgcggccatcagttggcttgtctgcaaaaattg
gcgtcatggcgcttacgtcaggcccgtgaacgtgacctggcggtgaactttgtcgttcgc
gaagagaatctgtggcaagttgctcgttatcagccaacttcgctgggtgagcttgactca
ctgggcttaagtgggcaagagattcgctatcatggccgtaccttgctggcgttggtagcg
gaaggtaatgctgttcctgaggatcagttgccaccaccggtgatcaatctgattgatcag
ccaggttacaaaaaagtctttaaagatattaaagcacttattgtgtcggtcagtgagcgc
agtgggctaagtagcgaattgttggcgtcacgccgccaaataaaccaattactcagttgg
cattggaaattgaagtcaacagaaactcaacctgaattattaagtggctggcgtggggat
ttattggctacggaattgactgagattttacagcaatattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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