KEGG T03644: CH48

Yersinia enterocolitica 2516-87: CH48_1633

Entry

CH48_1633         CDS       T03644

Symbol

recF

Name

(GenBank) DNA replication and repair RecF family protein

K03629

DNA replication and repair protein RecF

Organism

yet Yersinia enterocolitica 2516-87

Pathway

yet03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:yet00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CH48_1633 (recF)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yet03400]
    CH48_1633 (recF)
DNA repair and recombination proteins [BR:yet03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CH48_1633 (recF)

SSDB

Motif

Pfam:

SMC_N AAA_15 AAA_21 AAA_23 AAA_27 AAA_29 AAA_16 ABC_tran AAA AAA_13 AAA_17

Other DBs

NCBI-ProteinID:

AJJ28361

Position

complement(1830288..1831373)

AA seq 361 aa
MALTRLLIKDFRNIESADLALASGFNFLVGPNGSGKTSVLEAIYTLGHGRAFRSLQAGRV
IRHECAEFVLHGRVDANERESSVGLSKSRQGDTKVRIDGTDGHKVAELAQLLPMQLITPE
GFTLLNGGPKFRRAFLDWGCFHNEPGFFMAWSNLKRLLKQRNAALRQVSRYTQIRAWDQE
IIPLAERISEWRAAYSDAIAADISATCALFLPEFALSFSFQRGWDKESDYGELLERQFER
DRALTYTAVGPHKADFRIRADGTPVEDLLSRGQLKLLMCALRLAQGEFLTRQSGRRCLYL
LDDFASELDTGRRRLLAERLKATQAQVFVSAVSAEQVADMVGEKGKMFRVEHGKIEVQPQ
D

NT seq 1086 nt +upstreamnt +downstreamnt
atggctctgacgcgtttactgataaaagattttcgcaatatcgaatcggcagacttggca
ctggcgtcggggtttaattttttagttggccccaacggcagcggtaaaaccagtgtgttg
gaggcgatttataccctgggtcatggccgcgcttttcgtagtttgcaggcaggccgcgtg
attcgtcacgaatgtgccgaatttgtgttgcatggtcgggttgatgcgaatgagcgtgaa
tcatccgtagggctgagtaaaagccggcaaggtgataccaaagtgcgcattgatggcact
gatggtcataaagtggctgaattggcacaactactgccgatgcagctgattacccctgaa
gggtttaccttattgaatggcgggccaaaatttcggcgtgcctttttagactggggttgc
tttcataatgaacccggtttttttatggcctggagcaatctgaaaagattacttaagcag
cgcaacgccgcgctgcgccaggtgagtcgctatacgcaaatccgggcctgggatcaggaa
attatcccgctggctgagcgcattagtgagtggcgggcggcatacagtgacgcaattgcg
gcagatatttcagccacatgcgccctgttcctgccagagttcgccctgagtttctctttc
cagcgcggttgggataaagagagtgactatggtgagttgctggaacgccagtttgagcgt
gacagagcgctaacttataccgccgtcgggccacataaagcggattttcgcattcgggcc
gatggtacgccggtagaagatttgctatcgcgtggtcagctaaaattgctgatgtgcgca
ctgcggttagcgcagggtgagtttctcactcgacagagcgggcggcgttgcctgtatctg
cttgacgattttgcttccgaattagacaccggccgtcgtcgtttattggccgagcgttta
aaagctacccaggcacaggtttttgtcagtgcagtaagtgctgaacaagtggctgacatg
gtaggtgaaaagggcaagatgttccgcgtggaacatggcaaaatagaggttcaaccacag
gattaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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