KEGG   Yersinia enterocolitica 2516-87: CH48_3188
Entry
CH48_3188         CDS       T03644                                 
Symbol
clpV
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
yet  Yersinia enterocolitica 2516-87
Pathway
yet03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yet00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CH48_3188 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yet02044]
    CH48_3188 (clpV)
Secretion system [BR:yet02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CH48_3188 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 AAA_7 Sigma54_activat AAA_25 nSTAND3 AAA_14 TniB Zeta_toxin IstB_IS21 NACHT RuvB_N AAA_29 Torsin
Other DBs
NCBI-ProteinID: AJJ29126
Position
3542544..3545213
AA seq 889 aa
MAITRKNLFGKLDATLFKGIESATTICKLRGNPYVELIHWVNQLWHQEDNDLKHIVRYFA
VDVDAFERGLAQALARLPVGATSISDFSYHIELAIERAWVYASLECLDTRIRSGHLLLAM
LTNMELRRALLAIAPEMEKIPLEHLSSDFNFITQASPETNEAATDGSPMYDGALPGEASN
AINGKSTATLAQYTTDLTALAREGKIDPVLGRNHEISTMVDILLRRRQNNPLLTGEAGVG
KTAVVEGLALAIVAGEMPPALSQVSLLTLDVVALSAGASMKGEFEARLKNVLDEAMASPT
PVILFIDEVHTLVGAGGNAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTR
RFQVLQVDEPDEDTAISMLRGLTPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAI
SLLDTACARVAVAQFSQPAELQQLTFQSETAQTELSSLEKARHFGKGQDERAALLEATIA
QHSEAANKLEQRWQAERDLVTAITATRTALYELVSQPTPDEEKRQQYQQQLAQLEEQLLL
IRSAQPLVQAEVNATVIANIVADWTGIQVGQMLKDDIRAVMELPQRLEERVIGQPHALVQ
LSENIMTARAGMADPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNLITINMSEYQE
SHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFDKGQM
EDGEGRFIDFKNTILLLTSNVGSELLSNLFADPDTAPDQDGILSALQPELLKVFPAAFLG
RVTVIPYLPLQQSALQHIVRLHLDRIGQRLQSQHQLTLQYSDVVVDDVVSRCSVAETGAR
MLIRYIEQNITPEIGKFILRDHDAIPNQIVFVDKVENKFTISVLNEKDK
NT seq 2670 nt   +upstreamnt  +downstreamnt
gtggctattacaaggaaaaatcttttcggcaaactggatgccactcttttcaaaggtatt
gaaagtgcgacaacgatttgtaaattgcgtggcaacccttatgtagagttgattcattgg
gtgaaccaactttggcatcaagaagataacgatcttaaacatattgttcgctattttgct
gtcgacgtagatgcttttgaacgtggcctggctcaagcacttgcccgtttgcccgtcggt
gcgaccagcatttcagatttttcataccatatcgaattagcaatcgaacgggcatgggtg
tacgccagcctggagtgtttagatacacgtattcgcagcggacatttgttgctggcaatg
ctaaccaatatggagttgcgccgggcactgttggctattgctccagaaatggaaaaaatt
ccactggagcatttgagcagcgattttaactttattacgcaggcatcgccggaaaccaat
gaagcggccaccgatggtagcccaatgtatgacggcgcattaccgggtgaagccagcaat
gctattaacggcaaaagtaccgcgacattggcgcagtacaccacggatctgactgcatta
gctcgtgaaggcaagatagacccggtactggggcgcaaccatgaaatcagtacgatggtg
gatattttactgcgtcgtcgacaaaacaacccgttgctcaccggtgaagctggcgtgggt
aaaacagccgtagttgagggtctggcgctggccattgtcgcgggtgaaatgcctccagca
ctgagtcaggtgagtctgctaaccctggatgttgtggctctttcggcgggtgccagcatg
aaaggcgagtttgaagcacgcctgaagaatgttttagacgaagcaatggcttcaccaact
cctgtcatcctgtttatagatgaagttcacactctggtcggtgcgggggggaatgcagga
accggtgatgcagctaatttactcaaaccggcactggcgcgcggtcagttgcgcaccatt
ggcgcgacaacctggagtgagtttaaacgccatattgaaaaggatccggcgctaactcgt
cgtttccaggtacttcaggtcgatgaacctgatgaagatactgctatttcgatgctgcgt
ggattgactccggcgttagagaagcaccacggcgtatggatcatggatgaagccttgcaa
gctgcggtgcgattatcgcatcgttatatccctgctcgccagttaccggataaagcgatc
agcttgcttgacaccgcttgtgcacgtgttgccgtcgcacaattctcacagccggcagaa
ttgcagcaattgactttccagagtgaaaccgcgcaaaccgagttgtcatcgctggaaaaa
gcccgacatttcggcaaagggcaggacgagcgcgcagcactgttagaagccacgattgct
cagcactcggaagcggcaaacaaacttgaacaacgttggcaggcagagcgtgacttggtc
accgctattacagctacgcgaacggcgctgtatgaactggtgtcgcaacccacgcctgat
gaagaaaaacgccagcagtatcagcagcaattggcgcaacttgaagagcaattattgctt
attcgcagtgcgcagcctttggtacaagctgaggttaatgcaaccgtgatcgccaacatt
gttgcggattggaccgggattcaagtcggacaaatgctcaaagacgatattcgtgccgtg
atggagctgccgcaacgcctcgaagagcgagtgattggtcagccgcatgcgttagtccag
ttgagcgaaaatattatgactgcacgtgcggggatggcagacccaaggaaaccgttgggt
gtctttatgttggttggcccttccggggtgggtaaaacagaaacggcattggccattgcg
gaaagtatgtatggtggtgagcaaaaccttatcacgattaatatgagcgaataccaagag
tcacatacggtttcctcattaaaaggctcgccaccgggctacgtgggatatggcgaaggt
ggtgtattaaccgaggcagtacggcgtaaaccttatagtgttgtgctattagatgaaatt
gaaaaagcacattcagatgtccatgaactgttcttccaggtatttgataaaggccagatg
gaagatggcgaagggcggtttattgattttaagaacactattttgctgttaaccagcaat
gtgggtagcgaattattaagtaacttatttgctgatccggatactgctcccgatcaagat
ggaatattaagtgcgttgcaacctgaattgctgaaagtattccccgccgcatttttgggt
cgcgtcactgtgattccttatttgccgctccagcagagcgcgttgcagcatattgttcga
ttacatttagatcgtatcggccagcgtttacagtctcagcatcagctgacgttgcaatac
agtgatgtggtcgttgacgatgtagttagccgctgctcagtagcagaaaccggcgcccgt
atgcttattcgttatattgaacagaatattacacctgaaattggcaaatttattttacgt
gaccacgatgcgatacctaatcagatcgtgttcgtcgataaagttgaaaataaatttact
atttctgtactgaatgaaaaagataaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (26)   

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