KEGG   Yersinia enterocolitica WA: CH47_422
Entry
CH47_422          CDS       T03643                                 
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase srmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
yew  Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:yew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:yew03009]
    CH47_422 (srmB)
Enzymes [BR:yew01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CH47_422 (srmB)
Ribosome biogenesis [BR:yew03009]
 Prokaryotic type
  rRNA helicases
   CH47_422 (srmB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 P-loop_SecA CMS1
Other DBs
NCBI-ProteinID: AJI82019
UniProt: A0A485DG85
Position
complement(424020..425345)
AA seq 441 aa
MTVTNFSELDLDERLVDALRDKGYERPTAIQAAAIPPAMDGRDVLGSAPTGTGKTAAFLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKHTQLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RKQTLLFSATLEGEAIREFAERILTEPVELEADPSRRERKKIQQWYYRADNIEHKTALLV
HLLKQPEVQKSIIFVRTREKVHQLVSWLREAGINAWFLEGEMVQAKRTEAVIRLSDGRVN
VLVATDVASRGLDIDDISHVFNFDLPLTADVYLHRIGRTGRAGRKGVAISLVEAHDHLLL
GRIGRYLKEPLKPRVIDELRPTSKAPSEKSTGKPSKKVLAKRKELKEAGKEKTKVKVRHR
DAKNVGKRRKPKDKPDTKSAS
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgactgtaaccaatttttccgaactcgatctcgatgaacgcctggttgacgcattgcgc
gacaaaggctatgagcgcccgactgccattcaagctgcggctattccgccagctatggat
gggcgcgatgtattgggttcggcaccaacaggtaccggcaaaactgccgcctttttgctg
cccgccttgcagcatttgctggatttcccacgcaaaaaatctggcccaccacggattttg
atcctgacgccaactcgtgagttagccatgcaagtggcagatcaagcccgtgagcttgcc
aagcatacccaactggatatcgcgaccatcaccggtggtgtcgcttatatgaaccacgcg
gaagtctttagtgagaatcaggatattgtagtggcgacaaccggccgcttgctgcaatac
atcaaagaagaaaactttgactgtcgggcggtagaaaccctgattctggacgaagctgac
cgtatgcttgatatgggcttcgcacaggatattgaaactatctcggcagaaacccgctgg
cgtaaacagaccttacttttctcggccacgctagaaggtgaagctatccgtgagtttgcg
gaacgcatcctgactgagccggtagagctggaagctgacccctcacgccgtgaacgtaaa
aaaattcagcaatggtattaccgcgcagacaatattgagcacaaaactgccttgctcgtg
catttgctgaagcaaccagaagtacagaaatcaattatttttgtgcgtacccgtgaaaag
gtacatcaactggtcagttggttacgcgaagctggaattaatgcctggttccttgagggt
gaaatggttcaggccaaacgtaccgaagccgtgattcgtttaagcgatggtcgggttaac
gttctggttgcaactgatgtggcttcacgcggtctggatatcgacgatatcagccacgtg
ttcaactttgatttgccgctgactgctgacgtctaccttcaccgtatcggtcgtactggc
cgtgcagggcgtaaaggggttgctatttccctggttgaagcgcatgaccatttattgctg
ggtagaataggccgttatctgaaagagccattgaagccacgagtgattgatgagctgcga
ccaaccagtaaagcaccgagcgagaaaagcacaggtaaaccgtctaaaaaggttttagcg
aagcgtaaggagctaaaagaagccggtaaagagaaaacgaaggttaaggttcgccatcgc
gatgctaagaatgtgggtaagcgccgtaagccaaaggacaagcccgataccaagagtgcg
agttaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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