KEGG   Yersinia enterocolitica subsp. palearctica Y11 (serotype 0 3): Y11_05341
Entry
Y11_05341         CDS       T02010                                 
Name
(GenBank) DNA polymerase III delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
yey  Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
Pathway
yey03030  DNA replication
yey03430  Mismatch repair
yey03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yey00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Y11_05341
   03430 Mismatch repair
    Y11_05341
   03440 Homologous recombination
    Y11_05341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yey03032]
    Y11_05341
   03400 DNA repair and recombination proteins [BR:yey03400]
    Y11_05341
Enzymes [BR:yey01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Y11_05341
DNA replication proteins [BR:yey03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Y11_05341
DNA repair and recombination proteins [BR:yey03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Y11_05341
SSDB
Motif
Pfam: DNApol3-delta_C DNA_pol3_delta2 HolB_lid Cytochrom_C DUF6587
Other DBs
NCBI-ProteinID: CBY27647
UniProt: A0A0H3NW23
Position
569565..570599
AA seq 344 aa
MADQQRNSVMKWYAWLTAPYRQWVGQQTAGRGHHALLLHSLPGNGEEALIYGISRWLMCQ
QRQGEKSCGECHSCRLMLAGNHPDWYVLTLEKGKSSLGVELVRQQIEKLYSHAQQGGAKV
VWLPHAELLTDAAANALLKTLEEPPEKTYFLLDCHQPASLLATLRSRCFYWHLACPDTAL
SLQWLQRQIPAEPVSMLAALKLSEGAPLAAERLLQPERWATRTTLCHALHSALHSSDLLS
LLPQLNHDDAPERLQWISSLVLDALKWQQGAGQFAVNQDQLPLVQQLAGMAATPVLLHSA
QALGHCRHQLLSVVGVNRELLLTEFLLNWETALTTGTYSTLSSL
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggctgaccagcagagaaacagcgtaatgaaatggtatgcgtggctcactgcaccttat
cgtcagtgggtagggcagcagactgccgggcgaggccatcatgcattactgctgcactct
ttgcccggaaatggcgaagaagcattgatttacggtattagccgttggttgatgtgccag
caacgacaaggcgagaaaagctgtggtgaatgtcatagttgccgcttaatgttggcgggc
aatcatccggactggtatgtgctgacactggagaaaggtaaaagcagtctcggcgttgag
ctggtgcgccaacagattgaaaaactctattcccatgctcagcaaggcggagcaaaagtc
gtgtggcttccccacgcggagttgcttaccgatgcggcggcgaatgcgttgttaaaaacg
ttggaagagccaccggagaaaacctattttctactcgattgccatcaacctgccagtttg
cttgcgacactgcgcagccgctgcttttactggcatctggcctgcccggatacggcgctt
agcctgcaatggcttcagcggcagattccagcagaacctgtctcgatgctggcggcactt
aaattgagtgaaggtgcgccgttagcggccgagcgtttactgcaaccggaacgctgggcc
accagaaccactttgtgccatgcattgcatagcgcactgcatagctcggatttactgtcg
ttattaccgcaacttaaccatgatgatgctccagaacgcttacaatggatctcttcattg
gtgttggatgcgttgaaatggcagcaaggcgcgggtcaatttgccgtcaaccaggatcaa
ttgcctctggtacagcaattggctggcatggccgcaacaccggtattgctccattcagcc
caggcgctgggccattgccgccatcaattattatcggtggtaggtgttaatcgtgaatta
ttgctcaccgagttcctgcttaactgggaaacagcgctgaccacaggcacttattccacc
ttatcttcgttgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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