KEGG   Yersinia enterocolitica subsp. palearctica Y11 (serotype 0 3): Y11_40091
Entry
Y11_40091         CDS       T02010                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
yey  Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
Pathway
yey03410  Base excision repair
yey03430  Mismatch repair
yey03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yey00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Y11_40091
   03430 Mismatch repair
    Y11_40091
   03440 Homologous recombination
    Y11_40091
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yey03400]
    Y11_40091
DNA repair and recombination proteins [BR:yey03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Y11_40091
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Y11_40091
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Y11_40091
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: CBY28521
UniProt: A0A0H3P0I9
Position
4195150..4196883
AA seq 577 aa
MTLKTQLRRREAVDDSHLPAQLHPLLRRLYASRGVKSAEELERGVKGLLAWQQLDGIEAS
VTLLQQALADRRRIVIVGDFDADGATSTALAVLALRSMGGSNIDYLVPNRFEDGYGLSPE
VVEQVAARGAELIVTVDNGISSHAGVDLAHALGIQVLVTDHHLPGETLPAAEAIINPNLA
GCNFLSKSLAGVGVTFYLMLALRARLRDSGWFEQRTLAIPNLAELLDLVALGTVADVVPL
DANNRILVHQGLSRIRAGKCRPGIRALLEVANRDARQLVANDLGFSLGPRLNAAGRLDDM
SIGVALLLSDDIAQARALAIDLDALNQTRREIEQGMQVEALQLCDQLERTSTELPYGIAM
FHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGLLKGSGRSVTGLHMRDALERLDTLNP
GLMLKFGGHAMAAGLSLEQDKFDEFRQRFADLVGEWMDASQLEGVIWSDGELNGNELSLE
TAELLRDGGPWGQSFPEPTFDGKFRILQQRLVGERHLKLMIEPLNGGPLLDGIAFNIDTT
LWPDSSVREVKLAYKLDINEYRGNRSVQLLIQHLWPY
NT seq 1734 nt   +upstreamnt  +downstreamnt
gtgacattgaaaactcaacttcgccgtcgtgaggcggtggatgatagccatttgcccgcc
cagttacacccattgctgcgccgcctttatgccagccgtggcgtaaaaagtgccgaggag
ctggagcgcggtgtaaaaggcctgcttgcctggcagcaactcgacggtattgaagccagt
gttactctgttgcaacaagcattggctgacaggcgtcgtattgtgattgtcggtgatttt
gatgctgatggcgcaaccagcacggcgttggcagtgctcgctttgcgtagcatgggtggc
agtaatattgattatctggtgccaaatcgttttgaagatggctatgggctgagtcccgaa
gttgtcgagcaagttgctgcccgtggtgcagaactgatcgtcactgtcgataacggtatt
tcctctcatgcgggagtggatttggctcatgcactgggtatccaggtgttggttaccgac
catcacctgccgggtgaaaccttgccagcagcagaagctatcatcaatccaaatttggca
gggtgtaatttcctttccaaatccttggccggagtgggcgtcaccttttatctgatgctg
gcattacgtgcgcgtcttagagacagtggttggtttgaacagcgaactttagcgatacct
aacctggctgagttactggatttggtggcgctgggaacggttgccgatgtggtgccattg
gatgcaaataaccggattttggtgcatcaggggctaagccgtattcgtgccgggaaatgc
cggcctggtattcgtgcattactggaggttgccaatcgcgatgcgcgccaattggtagcc
aacgatctgggtttttcccttggcccacggcttaatgcagccgggcgtctggatgatatg
tccatcggggtggcgttgttgctcagtgacgatattgctcaggccagagcactggcaatt
gatcttgatgcgcttaatcaaacgcgccgtgagatagagcagggtatgcaggttgaagcc
ttgcaactgtgtgaccagttagagcgcaccagtactgaattaccttacggtatcgcgatg
tttcacccagagtggcaccaaggggtggtcgggattctggcctcacgcattaaagagcgt
tttcatcggccggttattgcttttgccccagcgggtgatggtttactgaaaggctcgggg
cgtagtgtgacaggcctgcatatgcgcgatgctcttgagcgcctggataccttaaaccca
gggttaatgctgaagtttggcggtcatgctatggcggcggggttatcgctggaacaggat
aaattcgatgaattccgtcagcgttttgcagatttagtcggtgaatggatggatgcctcg
cagttggagggggttatctggtcagacggtgaactgaatggcaacgaattatcactggaa
acagctgagttgttgcgcgatggcggcccgtgggggcaatcctttcctgaaccgacattt
gatggcaaattccgtatcttgcaacaacggctggtgggtgaacgccatctgaaacttatg
attgagcctttgaatggcgggcctttactggatggtatcgcgtttaatattgatacaact
ttatggccggatagcagcgtgcgcgaggttaaactggcttataaactcgatattaatgag
tatcgcggtaaccgcagtgtccagttgctgattcaacacctgtggccgtattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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