KEGG   Yersinia intermedia: CH53_1231
Entry
CH53_1231         CDS       T03608                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
yin  Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:yin00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:yin02048]
    CH53_1231
Enzymes [BR:yin01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     CH53_1231
Prokaryotic defense system [BR:yin02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   CH53_1231
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD PhoH RuvB_C
Other DBs
NCBI-ProteinID: AJJ20740
Position
complement(1411876..1414842)
AA seq 988 aa
MKLHFEPNLSYQWDAISSVCDLFEGQEKWQSEMTVLAPAQAALSFEGATGSMPVNPKIPN
DESLLKNLRNIQLRNQLPPSEKLNSHDFTVEMETGTGKTYVYLRTMLELNKRFGMSKFII
VVPSVAIKEGVYKTLQITEEHFKSLYAGVAYDYYLYDSAKPADVRNFATSSIMQIMVMTV
GAINKKDVNKLYQPSEKTTVEDLDKPIDLIRATRPVIIVDEPQSVDGGLNGAGKTALDAM
SPMFTLRYSATHIHKHHMIYRLDAIDAYNQKLVKQIEVAGMEVHNANNSPYVKLISINSK
KNAISATILVDVADKNGAVKPTEITVFDGSNLEDETGRNIYQGYRIGEIRISKSGFMTLE
TPVETHYLQEGDIIGNVDPLLLQRHMIRRTIREHLDKELRLNSQKIKVLTLFFIDKVDLY
RQQNADGSREAGEYARIFEEEYKKALKSPTYKDLVASHPDQASDVHDGYFSVDKKGSWAE
TSESNNTGRENAERGYNLIMKNKEKLLSFSNPVRFIFSHSALKEGWDNPNVFQICSLREM
GSERERRQTLGRGLRLCVNQEGERIRDDSINILTVIASESYEAYAERLQSEIERETGIQF
GVIEQDAFAHILIPCVNKLDPIGISGSKEIWTYLQDKGYLEKSGKITKSLKEALRDEKLI
LDDKYSNITDLVISILRKSAGRLNINDADTRTIINYRKEVLNSPEFEALWKRICQKTLYQ
LVFNENDLIQSCIKSITEMQVLNKAMVSFSKATLTQTLAGLEAKIQNNGTTTAVIAVDEQ
PIPDILGVLQEKTGLTRRSLNTILQKSGRLDDFTKNPQQFISEVITRINYCKRLAIVDGI
KYHPLKGEVYAQSLFKSKELTGYARNLFATSAKSVYEYVPQDSNIEGSFATQLEKQDEVK
LYTKLPGWFKIPTPLGTYNPDWALIIEKDGEDQIYFVVETKSKYIGLGNEEEAKITCGVA
HFDALTAEYTDPARYVHATNLNDVIGSI
NT seq 2967 nt   +upstreamnt  +downstreamnt
atgaaactgcactttgaacccaatcttagctatcaatgggatgctatttcatctgtctgc
gacctttttgaaggacaagaaaaatggcaaagcgaaatgacggtgctggctcctgcacag
gccgcattgtcttttgaaggtgccactggctctatgccggttaatcctaaaattccaaat
gacgagtcattgctcaaaaatcttagaaatattcagctacgtaatcagcttccaccgtca
gaaaaactgaatagtcacgatttcaccgttgaaatggaaaccgggacaggcaaaacttac
gtgtatcttcgcactatgctggagctgaacaaacgcttcggtatgagcaagttcataatt
gtagtcccgtcagttgctattaaggaaggtgtctacaaaactcttcaaattacggaagag
cattttaagagcctatatgctggtgttgcttatgactattatctttatgattcagcgaaa
ccagcagatgtaaggaattttgccaccagttctattatgcagataatggtaatgactgtc
ggggctatcaataaaaaagatgtcaataaactctatcagcctagcgaaaagactaccgtc
gaagatctggataaaccgattgatctaatccgtgctactcgtccagtaattattgttgat
gaaccacaaagtgttgacggtggtttaaatggtgcggggaaaacagcgttggatgctatg
agtccaatgtttactttgcgttattctgcaacgcatattcacaaacaccatatgatctac
cgtttggatgcgatagatgcctataaccagaaactggttaagcaaattgaagtcgcaggt
atggaagtccataacgccaataatagtccctatgttaagttaattagtatcaacagcaag
aaaaatgccattagtgccactattttggtagatgttgctgataaaaatggagcggtcaaa
ccaacagaaatcactgtgtttgatggctccaacttagaagatgaaacaggccggaatatt
tatcagggttatcggatcggtgagattcgtataagtaaatcaggatttatgacgctcgaa
acgcctgtagaaacacactatttacaggaaggagacatcattggtaatgttgatcctttg
cttcttcaacgtcatatgatccgccgtaccatacgtgaacatttagataaagaacttcgc
ctgaactcacaaaaaattaaagtattaaccctgttctttattgataaagtcgacctctac
cgtcagcagaatgcagatggtagtcgtgaagctggcgagtatgcccgcatctttgaagag
gaatataaaaaggctttaaagtcgcctacttacaaagatctcgtcgcttctcatcccgat
caggcttccgatgtgcatgatggctatttttccgttgataagaaaggttcgtgggctgaa
accagtgaaagtaataatacaggccgggagaatgctgagcgcgggtataatctgataatg
aagaataaagaaaaactacttagtttttctaacccggttcgttttattttctcacattca
gcattaaaagagggatgggataacccaaatgtattccagatctgtagtctacgagaaatg
ggcagcgaacgtgaacggcgtcagaccctcgggcgtggattacggctttgtgtcaatcag
gaaggtgaacgtattcgtgatgatagcattaatatcctgacagtcattgccagtgaaagt
tatgaagcttatgccgaacgtcttcagagtgaaattgaacgcgagacaggtatccagttt
ggcgtaattgaacaagatgcctttgctcatattcttattccctgcgtcaataaacttgat
ccaattggcataagtggctcaaaagagatatggacctaccttcaagataaaggttatctt
gagaaatcgggtaagatcactaagtctttgaaagaagcactgcgagatgaaaaacttatt
ctggatgataaatattccaatatcactgatttagtcatatccattttgcgtaaatctgcc
ggtcggctaaatattaatgacgcagatacccgtacaataatcaactatcgcaaagaagta
ttgaacagcccagagtttgaagctttatggaaacgcatatgccaaaaaacactttatcaa
ttggtatttaatgaaaacgatctgattcagtcctgcattaaatccatcaccgagatgcaa
gttttaaataaagctatggtcagcttcagtaaagccactctcactcagactttagctgga
ttagaagctaaaatacaaaataatggcaccaccactgcagttattgctgttgatgagcaa
ccaatcccggatattcttggggtattacaggaaaaaacggggcttacgcggcggagtttg
aacactatacttcagaaaagtggacggctggacgatttcactaaaaatcctcaacaattt
atcagtgaagtgattacaagaatcaactactgcaaacgtttggcgattgttgatggcatt
aaatatcatccacttaaaggtgaggtttatgctcagagtttatttaaaagtaaagagctt
accggttatgcgaggaatctttttgctacctcagctaaatcagtctatgaatatgtgccg
caggattcaaatatagaaggaagttttgctactcagttagaaaaacaagatgaagtaaaa
ctttataccaagttgccgggttggtttaaaattccaacgcctttaggcacctataatcct
gactgggcattgataatagaaaaagatggtgaagatcaaatctattttgttgtcgagacc
aagagtaaatatattggtttaggcaatgaagaggaggcgaaaataacctgtggtgttgct
cattttgatgctcttaccgctgaatacactgacccagcaagatacgtacatgctactaat
ttgaatgatgttattggaagtatttaa

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