KEGG   Yersinia rochesterensis: CH54_3357
Entry
CH54_3357         CDS       T03609                                 
Name
(GenBank) beta-eliminating lyase family protein
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
ykr  Yersinia rochesterensis
Pathway
ykr00330  Arginine and proline metabolism
ykr00480  Glutathione metabolism
ykr01100  Metabolic pathways
ykr01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:ykr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    CH54_3357
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    CH54_3357
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    CH54_3357
Enzymes [BR:ykr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     CH54_3357
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase
Other DBs
NCBI-ProteinID: AJJ34239
Position
3667392..3669554
AA seq 720 aa
MTQLKIATSARLASYVESQRGVVYLNQTDFTDVAAVVMSVEDASAGILSKLNDLGFAIPT
FIAVTAEQTVSTDYLPLIKGVITLGEANKAFYNAQVEAAASEYQKNLLPPFFSTLKKYVE
MKNSTFACPGHQGGEFFRKHPAGRQFFEFYGETIFRSDMCNADVKLGDLLIHEGAAKDAQ
KYAAKVFNADKTYFVLNGTSSANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNSFGFIGGIDAHCFDERYLRQQLAEVAPEHVNDTRPFRLAIIQLGTYDGTVYNA
RQVVDSIGHLCDYILFDSAWVGYEQFIPMMKDFSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQVHKKDNHIKGQKRHCNHKRFNNAFMLHASTSPFYPLFAALDVNAKIHSGDSGRRM
WMDCVKLGIEARKLLLERCSMLRPFIPPTVGGKNWQDYDTDIIANDARFFNFVPNERWHG
FEGYNQDQYLVDPCKLLLTTPGIDANSGQYTQFGVPAAILATFLRENGIVPEKCDLNSIL
FLLTPAENPAKMAHLVDMLAQFERYIEQDALLCDVLPTIYRKNEERYRGYTLRQLCQEMH
NLYVSHDVKQLQKDMFRKASFPPVVMNPQDANIQFIRDNIELIPIAEAEGRIAAEGALPY
PPGVLCVVPGEIWGGAVQRYFLALEEGINLLPGFSPELQGVYIEKGDVEWRRIFGYVITQ
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgacacagttaaaaatagcaacaagtgctcgtttggcttcttatgtagaaagtcagcgg
ggagtggtatacctcaatcagaccgatttcacagatgttgccgccgtggtgatgtcggtg
gaagatgcgagtgccggtatattgtcgaagctcaatgatttgggttttgctattcctact
tttattgctgttacggcagaacagacggtttctacggattatttgccccttattaagggt
gtcatcacactcggtgaggcaaataaagcattttacaatgctcaggttgaggctgctgcc
agcgaatatcaaaaaaatctgttaccaccttttttctcaacattaaagaaatatgtcgag
atgaaaaattcaacctttgcttgccctgggcaccaaggtggtgagtttttccgtaaacat
cctgctggccgtcagttttttgaattctatggtgagacgattttccggtcagatatgtgt
aacgccgatgtcaaattgggtgacttgcttatccatgaaggtgcggcaaaagatgcacaa
aaatatgcagctaaggtctttaatgcagataaaacctattttgtactgaatgggacttca
tcggccaacaaagtggttactaatgctttattgacccgtggtgatttagtgttatttgat
agaaataaccataaatctaaccatcatggcgcactgattcaagcgggggcgacgccagtc
tatttagaaactgctcgtaattcatttggatttattggtggcatcgatgcgcactgtttc
gatgagcgttatttacgtcagcaactcgctgaagtggctcctgaacatgtgaatgataca
cggccattcagattggcaatcattcagttaggcacttatgatggcactgtgtataacgct
cgtcaggtggttgatagtattggtcatttatgtgattacattttgtttgattctgcgtgg
gtcggttatgagcaatttattccgatgatgaaggatttctcgccactattgctagaatta
aatgaaaatgaccctgggattattgtgactcagtcagtgcataagcagcaggctggtttc
tctcagacttctcaagtgcataaaaaagataaccatataaaagggcaaaaacgccactgt
aaccataagcgttttaacaatgcgtttatgctgcatgcatcaaccagcccgttttaccct
ttattcgccgcgttagatgtgaatgccaaaatacattccggcgacagtggccgccgcatg
tggatggattgtgtaaagctcggtattgaggcccgtaaattattattagagcgctgctca
atgttacggccattcattccacccactgtagggggtaagaattggcaggattacgataca
gatattattgctaatgatgctcgcttctttaattttgtgcctaatgagcgttggcatgga
tttgaaggttataatcaagatcaatacctagttgatccttgcaaattattgctaacaaca
ccaggtattgatgctaacagcgggcaatatacccaatttggtgtgccagcagcgatactg
gcaactttccttcgtgaaaatggtattgtgccggaaaaatgcgatctgaattcgatccta
ttcctgctgacaccggctgaaaacccggcaaaaatggctcatctggttgatatgttagcc
caatttgagcgctatattgagcaagatgcgctgttgtgcgatgtattaccgacgatatat
cgtaagaatgaagagcgctatcgtggctatactttgcgccagttatgccaggaaatgcat
aacttatatgtcagtcatgatgttaaacagttgcaaaaggatatgttccgtaaagccagt
ttcccacctgtcgtgatgaacccgcaggatgccaatattcagtttatccgcgataatatt
gaactgattcctattgctgaagcggaagggcgaattgcggctgaaggggctttgccttat
ccaccaggcgtgttgtgtgttgtgccgggtgaaatatggggtggggcggtgcagcgttat
ttcctggcgctggaagagggcatcaatttattgccgggcttctccccggaattgcagggc
gtttatatcgaaaaaggtgatgtagaatggcggcgtatttttggttatgtcattactcag
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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