KEGG   Yarrowia lipolytica: YALI0D24497g
Entry
YALI0D24497g      CDS       T01033                                 
Name
(RefSeq) YALI0D24497p
  KO
K14808  ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
Organism
yli  Yarrowia lipolytica
Brite
KEGG Orthology (KO) [BR:yli00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:yli03009]
    YALI0D24497g
Enzymes [BR:yli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     YALI0D24497g
Ribosome biogenesis [BR:yli03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    YALI0D24497g
SSDB
Motif
Pfam: DEAD Helicase_C DBP10CT ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 2910446
NCBI-ProteinID: XP_503234
UniProt: Q6C7X8
Position
D:complement(3255830..3258610)
AA seq 926 aa
MSDSEVEYDIAGSLNPGVDSEDDYSSGSESDSEIPDIIEDSEDETGPQQGEPGTMTFPNL
ELSDDDDDDDDDDEGRKKKKKKTDDSVESYFGAPQTGKKSSGSFAGLGLSQLVLKNIARK
GFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLEKLKVHSAKVGARAVILSP
SRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQFKMMMSNPDIIIATPGRFLHLKVEM
ELSLASVEYICFDEADRLFELGFGEQMNELLASLPSNRQTLLFSATLPKTLVEFAKAGLH
DPILVRLDAETKLPEHLEMTFFAVKENQRDACLAFILKEVIQMPFATPEQLKELERLDER
AIDDGERDEDRKQKRPKFKKERLPPAHQLPSEKSTIVFCPTKHHVEYVIVLLQTLGYAVS
YIYGTLDQHARKNQLYRFRTGKTSILVVTDVAARGIDVPVLANVINYSLPPSPKVFIHRV
GRTARAGNRGWAYSIIKDNDIPYLLDLEVFLGRKLLTPRLFKQQNPDPSAEPDYVNTLTI
GAPPRQALEIHGEELAQMVKDSYELQQLSEVAVKGERMYNKTKGSASQESAKRSKQIMAL
GWDDHHLMFGEDGESAKDALLARLGQKRIRETVFEFRKSKTTSGAEMMATRRAQLAPIQR
RAAEKRAIQEKERLAGLVHSQDAEIARSTEEDMATEADLTGFTTEEDLRAAKKAQKSKKR
SFRDSENFMSHYAPTNDDKGYAVGNFAGAASNATFDLINDGSEMQQKQGMKWDKKKGKFI
NAGSEGGKKFIRGEGGQRIAASFRSGRFDKWKAAHKVGNLKVGALEESGPATKRVLSARE
FKHNKNEAPKRADKYRDDFHKQKTKVAAAKEDGRIQKPQPKSELKSTADVRKSRILAEKR
KQKNARPSRGGRGGGRGGRGGGRGGR
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgtccgacagtgaggttgaatacgacattgcggggtctttgaatccgggggtggattcg
gaagacgactattcgtccggatcagagtccgacagcgagattcccgacattattgaggac
agtgaagatgagaccgggccccagcagggcgaaccgggcaccatgactttccccaatctg
gaactgtccgatgacgatgacgacgacgacgatgacgacgagggcagaaagaagaagaag
aaaaagacggacgactcggtggaaagctactttggagcaccgcaaacgggcaaaaaaagc
tcgggcagttttgctggtctgggtttgtcgcagttggtgcttaaaaatattgcacgaaag
gggttcaagcagccgacgccgatccagcgaaagacgattccgctggttctggagggcaaa
gacgtggtgggaatggcccgaaccggaagtggcaagacagcggcgtttgtgctgcccatg
ttggagaagctcaaggtccacagcgccaaggtgggcgcgcgggcggtgattctgtcgccg
tcacgtgagctagcgctgcagacgctcaaggtggtcaaggacttttctgccggcaccgat
ctgcgtctggccatgttggttggaggcgattcgctggaggagcagttcaaaatgatgatg
tccaatccagacattattatcgccaccccaggccggtttctgcatctcaaggtggagatg
gagctgtcgttggcgtcggtggagtacatttgtttcgacgaggccgaccggctgttcgag
ctgggttttggtgagcagatgaacgagctgttagcgtcgttgcccagcaacagacagact
ctgctgttttccgccacgcttcccaagacgctggtggagtttgccaaggctggtcttcac
gacccgattctggttcgtctggatgccgagaccaagttgccagagcatttggaaatgacg
ttttttgccgtcaaggagaaccagcgagacgcctgcttggccttcattctcaaggaggtg
atccagatgccgtttgcaacgccggagcagctcaaagagctcgagcgactggatgaacgg
gccattgacgacggagaacgggatgaggaccggaaacaaaaacggcccaagttcaagaaa
gaacggctgccccctgcgcaccaattgccctcggaaaagtcgaccatcgtcttctgtccc
accaagcatcatgtggagtatgtcattgtcttgcttcaaactctggggtacgcggtttcg
tacatttacggcacgttggaccagcatgctcgtaagaaccagctgtatcggttccgcacg
ggcaaaacgtctatcttggtggtcactgatgtggctgcgcgaggtattgatgtgcctgtt
ctggccaatgttatcaattattcgcttcctccgtcccccaaggtgtttatccatcgtgtg
ggtcgaacagctcgagccggcaaccgcggatgggcttattccatcatcaaggacaacgac
attccgtatctgttggatctggaggtgtttttgggccgcaagctactgactcctcggttg
ttcaagcaacagaatcccgacccttcggccgagcccgattacgtcaacactctgacaatt
ggagctcctccgcgccaggcgctcgaaatccacggcgaggagctcgcccagatggtcaag
gactcgtacgagctgcagcagctgtcggaggttgcggtcaagggcgagcgaatgtacaac
aagaccaagggaagtgcttctcaggagtcggccaagcggtcaaagcagattatggcactg
ggatgggacgaccatcatctcatgtttggcgaggatggcgagtctgccaaggacgcgttg
ttggcacgattgggccagaagcgcattcgagaaacggtgtttgagttccgcaagagcaaa
accacctctggcgccgagatgatggccactcgtcgggcccagctggctccgatccagcgc
cgggccgcggaaaagcgtgccattcaggaaaaggagcggctggcgggtctggttcattcg
caggatgcggagattgcccggtctaccgaggaagatatggctaccgaggcggatctcacc
gggttcactacggaggaggatcttcgggcggccaagaaggcgcaaaagtccaagaagcgc
tccttcagagactcggagaacttcatgtcccactacgcacccaccaacgacgataagggc
tatgctgtgggcaactttgccggggctgcgtccaatgccacgtttgatctcatcaacgac
ggctcggaaatgcagcagaaacagggcatgaagtgggacaagaagaagggtaagttcatc
aacgcgggctcggagggtggcaagaagttcattcgaggtgagggaggccagcgaatcgcc
gcgtcgttccggtcgggccgattcgataagtggaaggccgcccacaaggtcggcaatctc
aaggttggcgctctggaggagtctgggcctgccactaagcgggttttgtctgcgcgagag
ttcaaacacaacaaaaacgaagcccccaaacgagccgacaagtaccgagacgatttccac
aagcaaaagaccaaggtcgccgctgccaaggaagacggacgaatccagaaaccccagccc
aagagcgagctcaagtccaccgccgatgttcgaaagagccgaatcctggccgagaagcgc
aagcagaagaatgcccggccgagtcggggtggcaggggtggaggtcgtggaggtcgtgga
ggaggtcgtggagggcgttaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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