KEGG   Yersinia pseudotuberculosis 1: BZ23_3612
Entry
BZ23_3612         CDS       T03679                                 
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ypc  Yersinia pseudotuberculosis 1
Brite
KEGG Orthology (KO) [BR:ypc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ypc03016]
    BZ23_3612 (gidA)
   03036 Chromosome and associated proteins [BR:ypc03036]
    BZ23_3612 (gidA)
Transfer RNA biogenesis [BR:ypc03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    BZ23_3612 (gidA)
 Prokaryotic type
    BZ23_3612 (gidA)
Chromosome and associated proteins [BR:ypc03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    BZ23_3612 (gidA)
SSDB
Motif
Pfam: GIDA GIDA_C_1st GIDA_C FAD_oxidored FAD_binding_2 HI0933_like Pyr_redox_2 AlaDh_PNT_C DAO Pyr_redox MarR_2 Thi4 Pyr_redox_3 NAD_binding_9
Other DBs
NCBI-ProteinID: AJJ69899
UniProt: A0A3G5IU88
Position
complement(4116095..4117984)
AA seq 629 aa
MFYPDQFDVIIIGGGHAGTEAAMAAARMGRQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEIDALGGLMAKATDLAGIQFRILNASKGPAVRATRAQADRVLYRLAVRTALENQPNLMI
FQQPVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIHIGLENYSGGRAGDPPS
ISLSQRLRELPLRVNRLKTGTPPRIDARTIDFSQLTPQLGDTPIPVFSFLGNAEQHPEQM
ACHITYTNEKTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPE
GLTSNEIYPNGISTSLPFDVQMQIVRSMKGLENARIIRPGYAIEYDFFDPRDLKPTLESK
YIQGLFFAGQINGTTGYEEAAAQGLLAGLNAGRFANEEDGWSPRRDEAYLGVLVDDLSTL
GTKEPYRMFTSRAEYRLMLREDNADLRLTETGRKLGLVDDIRWAHFSQKVEQIEKERQRL
RDIWVHPHSENVSEINALLKAPLSKEANGEELLRRPEIDYRLLTSLTSFGPALTDPQSAD
QVEIQVKYEGYITRQQEEIEKQLRNENTLLPVDLDYQQVSGLSNEVIAKLNDHKPSSIGQ
ASRISGITPAAISILLVWLKKQGLLRRSA
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgttttatccagatcaatttgacgtcatcatcatcggtggtggccatgcaggcaccgaa
gccgccatggccgcggcacgcatgggacgtcagaccttattgctgacgcacaatatcgat
actctggggcaaatgtcttgtaacccagcaatcggcggtatcggcaaggggcacttggtc
aaagaaattgatgctctgggtggcctgatggcgaaagcaacagacctcgcggggatccag
tttaggatactaaacgccagcaaagggcctgcggtaagagcaacccgcgctcaggctgac
cgtgttctgtatcgtttagcggtacgaacggcattggagaatcaacctaacttgatgatc
ttccagcaacctgttgaagatctcattgttgaaaatgatcgtgtcgttggcgcagtcaca
caaatgggtctgaaattccgtgccaaagcggtggtgctaactgttggtaccttccttgat
ggcaaaatacatattgggctagaaaattacagtggtggccgtgccggtgatcccccttcg
atctcattatcacaacgcttacgtgaactgcctttgcgagtaaatcgccttaaaacgggc
actccaccacgtatcgatgcgcgaactatcgactttagccaattaacacctcagttgggt
gatacgccaattccagtattctctttcttgggaaatgctgaacaacatcctgaacaaatg
gcttgtcatatcacctacaccaatgaaaaaacacatgaagtgatccgcaataacctggat
cgcagcccaatgtatgcagggatcatcgaagggatcggcccacgttactgcccatcgatc
gaagataaagtcatgcgttttgctgatcgtaattcacatcagatcttcctcgaaccagag
gggctaaccagtaacgagatctatccgaacggcatttctaccagtttgcctttcgatgta
cagatgcaaattgtccgctcaatgaaagggttggaaaatgcacgtattattcgtcccggc
tatgctatcgaatatgatttctttgatcctcgcgatttaaaaccgactctggaaagtaaa
tatattcaaggcttgttctttgcgggacaaatcaatggcacaacgggctacgaggaagct
gcggctcaagggctgcttgcagggcttaatgcgggccgttttgccaacgaggaggacgga
tggtcacctcggcgtgatgaagcttaccttggcgtgctggtggacgatttaagcactctc
ggcactaaagaaccgtaccgtatgtttacctccagagctgaataccgtttgatgctgcgt
gaagataacgctgatctacgcctgactgaaacaggccgcaaattgggattagtggatgat
atccggtgggcacatttcagccaaaaagttgaacaaattgaaaaagagcgccaacggctg
cgtgatatctgggtgcacccgcattctgagaatgtttcagagatcaatgcgctgctgaaa
gcacctttgtccaaagaagccaacggagaagagctactgcgtcggcctgaaatagactat
cgtttgttgacctctttgacatcatttggcccagcgttgactgatccacaatcggctgat
caagttgaaattcaagtcaaatatgaagggtatattactcgtcagcaggaagagatcgaa
aaacaactacgtaacgaaaataccttattgcccgttgatctcgattatcagcaagtctca
ggtttgtcgaatgaagtcattgccaaattgaatgaccataaacccagttcaattggtcag
gcatcccgaatttcaggtattacccccgcggcaatatctatcttactggtttggctgaaa
aaacaaggtttgttgcgccgcagtgcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (31)   

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