KEGG T01874: YPC

Yersinia pestis Harbin 35 (biovar Medievalis): YPC_1841

Entry

YPC_1841          CDS       T01874

Symbol

rluB

Name

(GenBank) 23S rRNA pseudouridylate synthase

K06178

23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]

Organism

yph Yersinia pestis Harbin 35 (biovar Medievalis)

Brite

KEGG Orthology (KO) [BR:yph00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:yph03009]
    YPC_1841 (rluB)
Enzymes [BR:yph01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     YPC_1841 (rluB)
Ribosome biogenesis [BR:yph03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    YPC_1841 (rluB)

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

ADV98449

Position

1801713..1802669

AA seq 318 aa
MGEKLQKILARAGHGSRREIEAIIQQGRVSVDGKVSKLGDRVEVTQSTKIRLDGHLLSIK
ESEENVCRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGSRWVAVGRLDVNTSGLLLFT
TDGELANRLMHPSREVEREYAVRVFGQIDDDKIKQLSRGVQLEDGPAAFRTISYQGGEGI
NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDINLPKGLPRGGWTELDLKATNYL
RELVELDVETVSKLPVEKDRRRVKANQIRRAVKRHTEVSGRQVAGRQGSARKGSTRQNVG
NAAPAATASRRSGPKKRG

NT seq 957 nt +upstreamnt +downstreamnt
gtgggtgaaaaattacagaaaatcctggcgcgcgctggccatggttctcgtcgtgaaatt
gaagccattatccagcaaggccgcgtcagtgttgacggtaaagtgtcaaagctaggtgat
cgtgtagaagtgacccagtccactaaaattcgtctggatggtcatcttctttcaattaaa
gaatctgaagaaaatgtgtgccgcgttctggcgtattacaagccagaaggtgagctttgt
acgcgtaatgatccggaaggtcgtccaacggtatttgaccgtttacctaaactgcgtggt
tcacgttgggttgcggttggtcgtttggatgtgaacacctctggtttattactgttcact
accgatggcgaattggctaaccgcctgatgcacccaagccgtgaagttgagcgtgaatat
gcggtgcgggtatttggtcaaatcgatgatgataaaatcaaacagttgagccgtggtgta
caactggaagatggccctgcggcatttcgtactatcagctaccagggtggtgaagggata
aaccagtggtataacgttacgttgaccgaagggcgtaatcgcgaagttcgccgtctatgg
gaagccgtaggcgtgcaggttagccgcctgattcgtgtgcgttatggcgacattaatttg
ccgaaaggcctgccacggggtggctggactgaactggatcttaaagccactaactacctg
cgtgaattggtcgaactggatgttgaaaccgtcagtaaattacccgttgagaaagatcgt
cgccgggttaaagccaaccaaatccgtcgtgcagttaagcgccataccgaagtctcgggc
cgccaggttgctggccgtcagggttcagcccgtaaaggctctacgcgtcaaaacgtgggt
aatgcggcacccgcagccacggcaagtcgccgtagtggcccgaaaaaacgcggttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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