KEGG   Yersinia pestis 91001 (biovar Microtus): YP_pMT083
Entry
YP_pMT083         CDS       T00165                                 
Symbol
caf1A
Name
(GenBank) putative F1 capsule anchoring protein
  KO
K07347  outer membrane usher protein
Organism
ypm  Yersinia pestis 91001 (biovar Microtus)
Pathway
ypm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ypm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    YP_pMT083 (caf1A)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ypm02000]
    YP_pMT083 (caf1A)
   02044 Secretion system [BR:ypm02044]
    YP_pMT083 (caf1A)
   02035 Bacterial motility proteins [BR:ypm02035]
    YP_pMT083 (caf1A)
Transporters [BR:ypm02000]
 Other transporters
  Pores ion channels [TC:1]
   YP_pMT083 (caf1A)
Secretion system [BR:ypm02044]
 Chaperone-usher system
  Type 1 pilus assembly protein
   YP_pMT083 (caf1A)
Bacterial motility proteins [BR:ypm02035]
 Pilus system
  Fimbrial proteins
   YP_pMT083 (caf1A)
SSDB
Motif
Pfam: Usher PapC_N PapC_C DUF6175
Other DBs
NCBI-ProteinID: AAS58715
UniProt: P26949
Structure
Position
pMT1:complement(73933..76434)
AA seq 833 aa
MRYSKLFLCAGLTLATLPCWGRAYTFDSTMLDTNSGESIDVSLFNQGLQLPGNYFVNVFV
NGRKVDSGNIDFRLEKHNGKELLWPCLSSLQLTKYGIDIDKYPDLIKSGTEQCVDLLAIP
HSDVQFYFNQQKLSLIVPPQALLPRFDGIMPMQLWDDGIPALFMNYNTNMQTRKFREGGK
SLDSYYAQLQPGLNIGAWRFRSSTSWWKQQGWQRSYIYAERGLNTIKSRLTLGETYSDSS
IFDSIPIKGIKIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFE
LANLPLGGGSGELKVIIHESDGTKQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQ
TSYVGALGMKYGLPRNLTLYGGLQGSQNYHAAALGIGAMLGDFGAISTDVTQADSQKNKQ
KKESGQRWRVRYNKYLQSGTSLNIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKP
KNKVQFNLSQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQN
INKYGEKTSELLSNIWLSFPLSRWLGNNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLY
WDVRERFNEKGRKYTSNALNLNYRGTYGEISGNYSYDQTQSQLGIGVNGNMVITQYGITA
GQKTGDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAE
ITNNIVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQSSSSGIVGD
NSGVYLTGLPKKSKILVKWGRDKNQSCSSNVVLPEKTDISGAYRLSTTCILNN
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgaggtattcaaagctgttcctgtgtgcagggttaactttggcaacattgccttgttgg
ggacgcgcatatacttttgactctactatgcttgatacgaatagtggagagagtatagat
gtatctctttttaatcaaggacttcaacttccaggtaattattttgttaatgtttttgta
aatggtcgaaaggtagactctggaaatatcgacttccgtctagaaaaacataatggaaaa
gaacttctttggccatgcctatcatccttacaattgacaaagtatggcattgatatagat
aaatatcctgatttaataaaatctggtacagagcaatgtgttgatttattagcaatacca
cattcagatgtgcagttttattttaatcagcagaaattatcgttaattgtgccaccacag
gcacttttacctagatttgatggcattatgccaatgcaattgtgggatgacggcattcct
gctctgttcatgaattataatacgaacatgcagacaagaaaattcagagaaggaggcaag
tctctggactcttattatgctcagttgcaaccgggattaaacataggggcttggcgcttt
cgtagttcaacctcatggtggaaacaacaaggatggcagcgttcgtatatttatgccgag
cgaggattgaatacaattaagagccgtttgacattgggggaaacctattctgatagcagt
atctttgacagtatcccgattaaggggataaaaattgcttcagatgaatcgatggttcct
tattaccaatggaattttgctccagttgttcgcggtatcgcacgtacacaagccagggta
gaggttttaagagatggctacactgtaagtaatgagttggtgccctcgggaccatttgag
ttagcaaatcttcctctgggtggggggagtggtgagctgaaagtcatcattcatgaaagt
gatggaacaaagcaagtttttacagttccatatgacacaccagcagtggcattacggaag
ggctatttcgaatattcaatgatggggggagaatatcgtccagctaatgatcttacacaa
acatcgtatgttggcgctcttgggatgaaatatggtttgccaaggaatcttacgttatat
ggtggactacaagggtcccaaaattatcatgccgcagctctgggtatcggtgctatgttg
ggtgattttggtgccatatctacagatgttactcaagcagacagccagaaaaataaacaa
aaaaaagaaagcggccaacgttggcgcgttcgatataataagtacttgcagagtggaaca
tcgttaaacattgctagcgaggaatacgccacagaaggatttaacaaactcgctgacacg
ttaaatacttattgtaaacctaatactagaaacgattgccgttttgattatgctaaaccc
aaaaacaaagtgcaattcaatttaagtcaaagcatacctggttcggggacgcttaatttc
agtggctacagaaaaaactattggcgtgacagtaggagcacaacttctttttctgtaggc
tataaccatttttttaggaatggtatgtcattgactttaaatttatcgaagacacagaat
atcaataagtatggagaaaaaactagtgagctattatctaatatctggttgagttttcct
ctcagtcgctggctaggtaataactcaataaattcaaattaccaaatgacatcagattct
catggtaacactacccatgaggtaggtgtgtacggtgaagcctttgatcgccaattatac
tgggacgttcgcgaacgttttaatgaaaagggcagaaaatatacctccaatgcactgaat
ttgaattatcgaggaacttatggggagatcagtggtaactacagctacgatcaaacccaa
agccaacttggtataggtgtaaatggcaatatggtaataactcagtacggtataacggct
ggccaaaaaactggagatactattgcattagtacaagcccctgatataagcggtgcttca
gtgggatactggccaggcatgaaaacagactttagggggtacaccaattatggttactta
accccttacagagagaataaggtagaaattaacccagttactttacccaatgatgcagag
ataacaaataatattgttagcgtgatcccgacaaagggagctgtagtattagcaaaattt
aacgcaaggattggtggacgattgtttttacatttaaaacgctctgacaataaacctgtt
ccatttggttctatagttaccattgaagggcaatcatccagctctggcattgtcggagat
aatagcggtgtctatttgactggactacctaaaaaatcaaaaatacttgttaagtggggg
agagataaaaatcaatcatgttcatctaatgtagttctaccagaaaaaacggatatttct
ggtgcttataggttatccacaacctgcatcttaaataactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (4)   
   PDB (4)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system