KEGG   Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_12240
Entry
UGYR_12240        CDS       T03887                                 
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb03030  DNA replication
yrb03430  Mismatch repair
yrb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yrb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UGYR_12240
   03430 Mismatch repair
    UGYR_12240
   03440 Homologous recombination
    UGYR_12240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yrb03032]
    UGYR_12240
   03400 DNA repair and recombination proteins [BR:yrb03400]
    UGYR_12240
Enzymes [BR:yrb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     UGYR_12240
DNA replication proteins [BR:yrb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     UGYR_12240
DNA repair and recombination proteins [BR:yrb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     UGYR_12240
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: AKA39088
UniProt: A0A085U965
Position
complement(2697700..2698149)
AA seq 149 aa
MKNATFYLLDHDQSSGELRAHEALACDLAAERWRAGKRVLIACESREQAQRLDEALWQRA
PEQFVPHNLAGEGPKYGAPVELAWPEKRGNSPRDLLISLLPEFAGFATAFHEVIDFVPYE
ETLKQLARDRYKSYRSVGFHLTTATPPTH
NT seq 450 nt   +upstreamnt  +downstreamnt
atgaaaaacgcaaccttctatcttctcgatcacgatcaatcctccggcgagctgcgggcc
cacgaagccttggcgtgcgatctggcggctgagcgctggcgggcaggcaaacgggtgctg
attgcatgtgaaagtcgggaacaggctcaacgtctggacgaagccttatggcaacgagcg
ccggaacaatttgtaccgcataatttggctggtgaagggccaaaatatggcgcaccggta
gaactggcctggccggaaaagcgtggaaattcaccgcgcgacctgctaattagcctgcta
cctgagttcgcaggttttgccaccgctttccatgaagtgatagacttcgttccttacgaa
gaaactttgaaacagttggcgcgcgaccgatataagtcatatcgcagcgtcggcttccat
ttgactacggctacgccgccaactcattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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