KEGG   Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_13390
Entry
UGYR_13390        CDS       T03887                                 
Symbol
dksA
Name
(GenBank) RNA polymerase-binding transcription factor
  KO
K06204  RNA polymerase-binding transcription factor
Organism
yrb  Yersinia ruckeri Big Creek 74 (serotype O2)
Brite
KEGG Orthology (KO) [BR:yrb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:yrb03000]
    UGYR_13390 (dksA)
   03021 Transcription machinery [BR:yrb03021]
    UGYR_13390 (dksA)
   03009 Ribosome biogenesis [BR:yrb03009]
    UGYR_13390 (dksA)
Transcription factors [BR:yrb03000]
 Prokaryotic type
  Other transcription factors
   Others
    UGYR_13390 (dksA)
Transcription machinery [BR:yrb03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     UGYR_13390 (dksA)
Ribosome biogenesis [BR:yrb03009]
 Prokaryotic type
  rRNA transcription factors
   UGYR_13390 (dksA)
SSDB
Motif
Pfam: DksA_CC zf-dskA_traR DZR EDS1_EP
Other DBs
NCBI-ProteinID: AKA39290
UniProt: A0A085U365
Position
complement(2977522..2977977)
AA seq 151 aa
MQEGQKRKTSSLSILAIAGVEPYQEKPGEEYMNAAQLSHFKLILEAWRNQLRDEVDRTVS
HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDDDFGFCESCGVE
IGIRRLEARPTADLCIDCKTLAEIREKQMAG
NT seq 456 nt   +upstreamnt  +downstreamnt
atgcaagaagggcaaaaacgtaaaacctcgtccttgagcattctcgccatcgctggggtg
gagccgtaccaagagaagccaggcgaagagtacatgaatgccgcccagctttcgcatttt
aagctgattcttgaagcgtggcgcaatcagctcagggatgaagtagaccgtactgtatct
cacatgcaagacgaagctgctaacttccctgatccggttgaccgtgcagctcaagaagag
gaattcagtcttgaacttcgtaaccgcgatcgtgagcgtaagctcattaagaagatcgag
aaaacgctgaaaaaagtggaagatgacgacttcggtttctgcgaatcttgtggtgtagaa
atcggtattcgccgtttggaagcacggccaactgcagatttatgcattgactgtaaaacc
ttagctgaaatccgcgaaaagcagatggctggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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