KEGG   Yersinia similis: BF17_01425
Entry
BF17_01425        CDS       T03057                                 
Symbol
rnhB
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
ysi  Yersinia similis
Pathway
ysi03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ysi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BF17_01425 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ysi03032]
    BF17_01425 (rnhB)
Enzymes [BR:ysi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     BF17_01425 (rnhB)
DNA replication proteins [BR:ysi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     BF17_01425 (rnhB)
   Elongation factors (archaeal)
     BF17_01425 (rnhB)
SSDB
Motif
Pfam: RNase_HII
Other DBs
NCBI-ProteinID: AHK18169
Position
complement(222148..222744)
AA seq 198 aa
MSETFIYPQANLIAGVDEVGRGPLVGAVVTAAVILDPNRPIVGLADSKKLSEKRRLSLYD
EITEKALSWSLGRAEPEEIDQLNILHATMLAMQRAVSGLHIVPDYVLIDGNRCPKLQMPS
LAVVKGDSRVAEISAASILAKVTRDREMTELDLLFPEYGFAQHKGYPTAFHLEKLAALGA
TVHHRRSFSPVKRVLGLV
NT seq 597 nt   +upstreamnt  +downstreamnt
atgagcgagacttttatttacccacaggctaatttaatcgctggcgtggatgaagtgggt
cgtggccccttggtgggtgctgtagtcactgcggcggtgatccttgaccctaatcggcca
atagttggcttggcagattcaaaaaaactcagtgagaagcgccgtctgtcactgtatgac
gaaatcactgaaaaggcgctatcatggagcctcggtcgtgctgaaccagaagaaattgat
caacttaatattttgcacgcaaccatgcttgcgatgcaaagggctgtctcggggctgcat
attgtacccgattatgtgttgatcgatggtaatcgttgcccgaaattacagatgccgtca
ctggccgttgtcaaaggagatagccgggtggcggagatcagcgcggcttctattttagct
aaggtgacgcgtgatcgtgaaatgactgagttggatctcctcttccctgaatatggtttc
gcacaacataaaggctacccaacggcttttcatttggaaaaattagctgcgcttggtgca
acggtacatcaccggcgcagttttagcccggttaaacgggtgctgggtttggtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system