KEGG T07911: 102068494

Zonotrichia albicollis (white-throated sparrow): 102068494

Entry

102068494         CDS       T07911

Symbol

VPS50

Name

(RefSeq) syndetin

K23288

syndetin

Organism

zab Zonotrichia albicollis (white-throated sparrow)

Brite

KEGG Orthology (KO) [BR:zab00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zab04131]
    102068494 (VPS50)
Membrane trafficking [BR:zab04131]
Protein recycling
  Others
   EARP complex
    102068494 (VPS50)

SSDB

Motif

Pfam:

Vps54_N Syndetin_C

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

Position

Unknown

AA seq 965 aa
MQKIKSLMTRQGLRSPQESVNDLSPIENLRIPTKEELRELHEEPPDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQSGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAVVSSD
GNNVIGTEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLDVI
SRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSSFS
ILQLHEFKFLEQSRSPSVSPSKQPASAASSAVTLFEQYCAAGNPFEIQADSKDDETEDVL
ASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLRSRKRSDYNL
NKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRNDM
FESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLTAAEERKEKVPSPHLSHLVVLTS
GNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKP
VYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNDVSKRVRI
PLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPD
KEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNICLGTYINKKARQKLLATIDDT
DRPKR

NT seq 2898 nt +upstreamnt +downstreamnt
atgcagaagatcaagtcgctgatgacccgccagggtctacgaagtcctcaggagagtgtt
aatgacctcagtcctattgaaaacttacggattcctactaaggaggagctcagagaacta
catgaagaaccacctgatcctcaggcacaacaggaaataattaacagcattgaagaagtt
tatttttccaatgactcctttgatatagtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaactaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgaaaaacagcctgcatatgttgaggagcttgaa
cgtgttacatcattgcagagtggccttcagctggcggcggttatttgcacaaatggaaga
agacacctgaatatagcaaaggaagggttcacacaaactagtttggggctccttgcaaat
cagaggaaacgacagttgcttattggactgctaaaatctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaggaggattatccaggagctatt
caactatgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttaaattcaaaactgcaagacaccttggaacaaatagaggaacaattggacgtagca
ctttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcacccaagcc
attcacaacactgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagttccagaagttacagtacaaagacctctgtacacacatcacatcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaaccatgaccaagatgaggcagcggttgtgtcttctgat
ggcaacaatgtgattggaactgaagagaacagttttgaccgcaactatgtaaaaaagaaa
ttggagcatgggctttcacgaatatggcaggatgttcagttgaaagtgaaaacatatctt
ctgggaacagatttgtctaacttcaaatatgatgacttcatatttgtacttgatgttatc
agcaggctgatgcaggttggagaagaattttgtggcagtaagtctgaagttttgcaagaa
tctatcagaaaacaaagtgttaactatttcaaaacataccacagaacccgtcttgaggaa
ctaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagctttagt
attttgcagcttcacgaatttaagttcctggagcagtcgcgctccccgtcggtgtcgccg
agcaagcagcctgcctctgcggcgtcatcggccgtcacgctgtttgagcagtactgcgcc
gccggaaaccccttcgaaatccaggccgacagcaaggatgatgagacagaggatgtgcta
gcttccaatgggtatgaatcagatgaacaagaaaaaagtgcatatcaagagtatgatagt
gacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacaggagatgcc
ccaattaaaagtgtttctcgagaaactctgaggagcagaaagagatcagattataacctc
aataaagtgaatgcacctattctaaccaacactacactgaatgtaataaggcttgttggg
aaatacatgcagatgatgaatattctgaagcctattgcatttgatgtgatccacttcatg
tcccagctctttgattactatctgtatgcagtctatacattttttggccgaaatgacatg
tttgaatctacaggactgggcctcagcagcagcagattacgcaccacactgaacagaatc
caggagagtctgattgatctggaggtgtctgctgatccttcagggactctcacagctgct
gaagagagaaaagagaaggtgccaagcccacatctcagtcatctcgtagttttgacatct
ggcaattcgctgtatggcttggcagagagagtggtggccacagaatccttggtatttctg
gctgagcagtttgaatttcttcagcctcatcttgatgcagtgatgccagctgccaagaag
ccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgtaaacca
gtttattggattgttgctgctaaagccattgactatgaacaaatgcttctactgatggct
aatgtgaaatgggatgtgaaggaaatcatgtcacagcacaatgtatatgtagatgctctt
ttaaaggaatttgaagaatttaacaggaggttgaatgatgtgtctaagagagtccgtatt
ccattgccagtctccaacatcctttgggagcactgcatacgcttggccaatagaaccctt
gtggaaggttatgccaatgtaaagaagtgcagtaatgaaggacgtgccttgatgcagctg
gattttcaacaattcttaatgaaactagaaaagttaacagacattaggcctattccagat
aaagaatttgtggaaacctacattaaagcatactacctgacagaaaatgacatggaatcc
tggataaaagaacatagggaatattccactaagcagctgaccaatctggtgaatatttgt
ctgggcacctacatcaacaaaaaggcaagacagaagctgttagctaccattgatgacaca
gacaggcctaagagataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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