KEGG   Ziziphus jujuba (Chinese jujube): 107432671
Entry
107432671         CDS       T04794                                 
Name
(RefSeq) histone deacetylase complex subunit SAP18
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03013  Nucleocytoplasmic transport
zju03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107432671
   03015 mRNA surveillance pathway
    107432671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107432671
   03036 Chromosome and associated proteins [BR:zju03036]
    107432671
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107432671
Chromosome and associated proteins [BR:zju03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     107432671
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 107432671
NCBI-ProteinID: XP_015899343
UniProt: A0A6P4ARR0
Position
11:complement(join(15379605..15379637,15379732..15379803,15381363..15381458,15381964..15382074,15382464..15382496,15382755..15382838))
AA seq 142 aa
MAGVADAPKRTLPPPLRGPRFEPVDREKTCPLLLRVFTKIGSHHANEDFAVRGKEPKDEV
QIYTWKDATLREITDLVKEVAPAARRRNAKLSFAFVYPDKHGRFLVREVGKTFSYGNGRL
DDGKALAELGFQIGDYLDVAIL
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcgggagtagcagacgcgccaaagagaacgctgcctcctccacttagaggccctcgc
ttcgagcccgtcgaccgcgaaaagacttgtcccttattacttcgggttttcaccaagatt
ggaagtcatcatgccaatgaagattttgctgtgagaggcaaggagcccaaggatgaggtt
caaatttatacatggaaggatgcaacccttcgtgaaattactgatctggtcaaagaggta
gctccagcagcaaggagaaggaatgcaaaactgtcctttgcttttgtatatccagataaa
catggacggtttttggtgagggaggtggggaaaacattttcttatggaaatggtagactt
gatgatggcaaggcattggctgaacttggctttcagattggagattacttggatgtggca
attttgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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