KEGG   Ziziphus jujuba (Chinese jujube): 107433270
Entry
107433270         CDS       T04794                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3 isoform X1
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:zju00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107433270
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:zju01002]
    107433270
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zju04131]
    107433270
   04121 Ubiquitin system [BR:zju04121]
    107433270
Enzymes [BR:zju01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     107433270
Peptidases and inhibitors [BR:zju01002]
 Metallo peptidases
  Family M67
   107433270
Membrane trafficking [BR:zju04131]
 Endosome - Lysosome transport
  Others
   Others
    107433270
Ubiquitin system [BR:zju04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    107433270
SSDB
Motif
Pfam: JAB USP8_dimer Prok-JAB
Other DBs
NCBI-GeneID: 107433270
NCBI-ProteinID: XP_024922436
UniProt: A0A6P4AP47
Position
11:complement(join(27363298..27363472,27364729..27364781,27365270..27365332,27366495..27366569,27367015..27367077,27367203..27367292,27367420..27367750,27367956..27368014,27368106..27368208,27368697..27368794,27369114..27369311,27369403..27369478,27369616..27369680,27370387..27370488))
AA seq 516 aa
MVKINVNSMARKVEVDNRIHIRFYYRIAENLLKQANVYREEKNIVDLYIMLLRFSSLVSE
TIPYHRDYQAVLPKERILYRKKLISVLDELESLKPEFDRRVGELNKGHAGTQLPQLDGPE
RTLYSSENSSLEWPAVNKRLPTISSKQPASMATQSSWKYNNDQSLVLSNSTLIDKQFQKL
SIKPLPNKDTLSRHSFLGPNGLRGQWLGPTAEIKVQYPSSVGLTSIEIPAESTSLNQAGQ
SDIAVVKDGNSGGIQSTMDSVLSLDDGRWLHTAEDSCPAFINEAREDIFQLSNIHQPSPP
PVLARVQQDHAPIPPSKVADPRPGPAKPSQDGMPSSNAYQHLHVPVKMMEDFLRLAQANT
EKNLETCGVLAGSLKNRVFHISTLIIPKQESTSDSCQTLNEEEIFEVQDSLSLFPLGWIH
THPSQTCFMSSVDLHTHYSYQIMLPEAVAIVMAPTDTSSPHGIFHLSDPGGVSVIRNCQQ
RGFHPHEEPSDGNPIYEHCSHVYINPNLKFDVVDLR
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggtgaagatcaacgtgaactccatggctcggaaagtggaggtcgataatcggattcat
atccgattctactatcggatagcggaaaatcttctaaaacaggccaatgtatacagggag
gaaaaaaatattgtagatttgtacatcatgcttctcagattttcaagtttggtatctgaa
actataccgtaccatcgagattaccaagctgttctacccaaagaaagaatactatatagg
aagaaattgatatctgtcctagacgagcttgaatctttgaagcctgaatttgatcgcaga
gtgggagaacttaataagggccatgctggaactcaactgcctcaacttgatggcccagaa
aggactttatacagttcagagaattcttctttagagtggcctgctgtaaataaaaggtta
ccaactataagttctaagcagcctgcaagcatggctacacagtcatcttggaagtataac
aatgatcaatccttggtcttatcaaattctacgctaatcgacaagcagttccaaaagcta
tcgattaaacctcttccaaataaggatactttgtctagacattcatttttaggtccaaat
ggtcttcgaggccagtggcttggacccactgcagagattaaggttcagtatccgagcagt
gtaggcttgacctctattgaaattcctgcagaaagcacaagtctgaatcaggctggacaa
agtgatattgcggtggtaaaagatggcaattcagggggaattcaatctacaatggattca
gttctctcattagatgatggcagatggctacatacagctgaggattcatgccctgcattt
attaatgaagcgagggaagatattttccagttaagtaatatccatcaaccttctccaccg
cctgttcttgctcgagtacaacaagatcatgctccaattccaccatcaaaagttgcagat
ccaagacctggacctgcaaaaccttctcaggatgggatgccaagttctaatgcatatcaa
catctacacgttccagtaaaaatgatggaggatttcttgagattagctcaagcaaataca
gaaaagaatttagaaacttgtggtgttcttgcaggttcactgaaaaacagggttttccac
atcagcacactaataatacccaagcaagaatcaacttctgattcgtgtcaaacattgaat
gaggaagaaatatttgaagttcaagacagtttatctctttttcctcttgggtggattcat
acgcacccatcacagacctgtttcatgtcatcagttgatttgcacactcattattcatac
cagataatgttaccagaggcagttgccatagttatggctcccacagatacatccagtccc
catggcatatttcatctgtctgacccaggtggcgtatctgtcattcgaaattgtcaacaa
cgtgggtttcacccccatgaagagccttccgatggaaatcctatttatgagcactgttct
catgtctatataaatcccaatttaaagtttgatgttgttgatcttcggtga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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