KEGG   Zea mays (maize): 100282925
Entry
100282925         CDS       T01088                                 
Name
(RefSeq) uncharacterized protein LOC100282925
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
zma  Zea mays (maize)
Pathway
zma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100282925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    100282925
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     100282925
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 nSTAND3 AAA AAA_28 NACHT SMC_N Zeta_toxin AAA_25 AAA_30 AAA_18 AAA_23 AAA_5 AAA_15 AAA_22 SRP54 PduV-EutP AAA_33 AAA_24 Arf AAA_16 AAA_14 AAA_7 Rad17
Other DBs
NCBI-GeneID: 100282925
NCBI-ProteinID: NP_001149302
UniProt: B6TCU4
Position
4:177233082..177237200
AA seq 295 aa
MAGEGNGDEGWRRSGIEVSALQFGYDGQPPLFARFNLCVAPGSRCLLVGANGSGKTTLLK
ILAGKHMVGGRDVVRVLNGSAFHDTQLVCNGDLSYLGGSWSRTIGSAGDVPLQGDFSAEH
MIFGVDGVDPVRREKLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVD
LDVVTRMDLLGFFKEECEQREATIVYATHIFDGLETWATDFAYIQEGELRRSGRYSDIEE
LRSAKNLLSVVESWLRSETKLPKKEPPPRPETQARRSSPFDASPFRSSRHMAYYR
NT seq 888 nt   +upstreamnt  +downstreamnt
atggccggcgaagggaatggggatgaagggtggaggcggagcggcatcgaggtcagcgcc
ctgcagttcggctacgacgggcagccgccgctcttcgcgcgcttcaacctctgcgtcgca
cccggctcccgctgcctcctcgtcggcgccaacggatcaggcaagaccacactcttgaag
attcttgcgggaaagcatatggttggaggaagagatgtggtccgtgtcctcaatggttcc
gcttttcatgatacacagctagtgtgcaatggtgacctttcgtacttgggtggttcttgg
agccgtactattggttcagctggggatgttccactgcaaggcgacttctctgctgagcac
atgatttttggagttgatggggttgatcctgtcaggcgagagaagctggttgatctgcta
gacattgatctgcagtggcgcatgcataaagtttcagatgggcagcgccgcagggtgcaa
atctgcatgggtcttcttcatccatacaaggtgcttttgctcgatgagatcacggttgat
ctggacgtggtgaccaggatggacctgcttggtttcttcaaggaagagtgcgagcagagg
gaagctaccatcgtgtacgccacccatatatttgacggactcgagacgtgggctaccgac
tttgcgtacatccaagaaggcgagctgagaaggtccgggagatactccgacatcgaggag
ctaaggagcgccaagaacttgctgtcggtagtcgagtcgtggctgaggtcagagaccaaa
cttccgaagaaggaacccccaccacgtcctgagacccaggccaggcgttcctcgccgttc
gatgcttctcctttccgttcgtcacgccacatggcctactaccgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (25)   
   Pfam (25)   
All databases (45)   

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