KEGG   Zea mays (maize): 541614
Entry
541614            CDS       T01088                                 
Name
(RefSeq) squalene synthase 1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
zma  Zea mays (maize)
Pathway
zma00100  Steroid biosynthesis
zma00909  Sesquiterpenoid and triterpenoid biosynthesis
zma01100  Metabolic pathways
zma01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:zma00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    541614
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    541614
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:zma01006]
    541614
Enzymes [BR:zma01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     541614
Prenyltransferases [BR:zma01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   541614
SSDB
Motif
Pfam: SQS_PSY DUF3094
Other DBs
NCBI-GeneID: 541614
NCBI-ProteinID: NP_001104839
UniProt: O22106
Position
5:complement(3957042..3967809)
AA seq 401 aa
MGALSRPEEVLALVKLRVAAGQIKRQIPPEEHWAFAYSMLQKVSRSFALVIQQLGPELRN
AVCIFYLVLRALDTVEDDTSIPTEVKVPILQEFYRHIYNRDWHYSCGTNHYKMLMDKFRH
VSTAFLELGEGYQKAIEEVTRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGYGLSRLF
YAAGTEDLALDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYADKLEDFK
YEENSKKAVQCLNNMVTDALIHAEECLQYMSALKDPAIFRFCAIPQIMAIGTCALCYNNV
HVFRGVVKMRRGLTARIIDETNSMTDVYTAFYEFSSLIESKIDDSDPNAALTQRRVDSIK
QTCKSSGLVKQRGYHLEKSPYRPMLIMIVLLLVAILFGVMF
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgggggcgctgtcgcggccggaggaggtgctggcgctggtaaagctgcgggtggcggcg
gggcagatcaagcgccagatcccgcccgaggagcactgggccttcgcctactccatgctc
cagaaggtgtcccgtagcttcgctctcgtcatccagcagctcggacccgaactccgcaat
gccgtgtgcatcttctacctcgtgctccgtgccctcgacaccgttgaggacgacactagc
atcccgaccgaggtgaaggtgcccatcctccaggaattctaccggcacatctacaaccgc
gactggcattattcgtgtggaacaaatcactacaaaatgctaatggataagtttcgccac
gtatccactgccttcctggagcttggtgaaggttaccaaaaggcaatagaagaagtcact
aggcgaatgggtgcaggaatggcaaaatttatatgcaaagaggttgaaactgttgatgac
tatgacgagtattgtcactatgtagctgggctagttggttatggactttccaggctcttc
tatgctgctgggacggaagatctggctctagattcactgtcaaattcaatgggcctattt
ttacagaaaactaacataattagggactatttggaggacataaatgagataccaaagtcc
cgcatgttctggcctcgagagatatggagtaaatatgcagataaacttgaggacttcaaa
tatgaggagaactccaaaaaagcagtacaatgcttgaacaatatggtgactgatgcactg
attcatgctgaagagtgccttcagtacatgtcagccttgaaggatcctgccattttccgt
ttttgtgcaataccccagataatggcaattggaacatgtgctctttgctacaataacgtg
catgtcttcagaggagttgtgaagatgagacgtggtctcacggcacgaataattgacgag
acaaactcaatgacagatgtctatactgctttctatgagttttcttcattgatagagtca
aagattgatgacagtgatccaaatgctgctctaacacagagacgtgtggattcaataaag
caaacttgcaagtcatctggtttggtaaagcaaagggggtaccatttggagaagtcacct
tacaggcctatgctgatcatgattgtcctcctgctggtagctattcttttcggggtaatg
ttctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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