KEGG   Zea mays (maize): 542185
Entry
542185            CDS       T01088                                 
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
zma  Zea mays (maize)
Pathway
zma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    542185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    542185
   03110 Chaperones and folding catalysts [BR:zma03110]
    542185
   03029 Mitochondrial biogenesis [BR:zma03029]
    542185
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zma04147]
    542185
Enzymes [BR:zma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     542185
Messenger RNA biogenesis [BR:zma03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     542185
Chaperones and folding catalysts [BR:zma03110]
 Heat shock proteins
  HSP60 / Chaperonin
   542185
Mitochondrial biogenesis [BR:zma03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    542185
Exosome [BR:zma04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   542185
  Exosomal proteins of other body fluids (saliva and urine)
   542185
  Exosomal proteins of breast cancer cells
   542185
  Exosomal proteins of colorectal cancer cells
   542185
  Exosomal proteins of bladder cancer cells
   542185
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 542185
NCBI-ProteinID: NP_001306697
UniProt: C0PHP3
Position
9:27938576..27943717
AA seq 600 aa
MCLLRSFSHANVTPAAHAVEDMASTFGATSTVGLMAAPTGKNVRLQRRANFRVKAAKELY
FNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDP
VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAK
ALVEELRKLSKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGKSSENF
LYVVEGMQFDRGYISPYFVTDSEKMTAEYENCKLLLVDKKITNARDLINVLEEAIRGAYP
ILIIAEDIEQEALATLVVNKLRGSLKIAAIKAPGFGERKTQYLDDIAILTGATVIRDEVG
LSLDKADKSVLGTAAKVVLTKESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQEYEKEKLN
ERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKV
DAIKDTLENDEQKVGAEIVRRALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKYGYNAATG
QYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVDIKEPEAAPVANPMDNSGYGY
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgtgtctgcttcgatcgttttctcatgctaatgtgactcctgccgcacatgcagtagaa
gacatggcctcgacgttcggtgccacttctacagttggccttatggctgctccaacgggg
aagaatgtgcgccttcagaggagggctaacttcagagtaaaagcggctaaggagctgtac
ttcaacaaggatgggtcagctatcaagaagctccagactggagtcaataagcttgcagac
ctagttggagttacactcggaccgaagggaaggaatgtcgttttggagagcaagtacggc
tctcccaagattgttaacgatggcgttacagttgcaagagaggttgagctggaggaccct
gtggaaaacattggagctaaattggtcaggcaagctgcagctaagaccaacgatcttgct
ggagatgggacaaccacctctgtggtccttgctcaggggctgattgctgagggtgttaag
gtcgtggcagctggtgctaatcctgttcagattactcgtggtattgagaaaacagctaaa
gcactagttgaagaactaaggaagttgtctaaggaggttgaagatagtgagcttgcagat
gttgctgcagttagtgctggcaacaactatgaaattggtaacatgatagcagaggccatg
agcaaggtcggtcggaagggcgttgtcacccttgaagaggggaagagttctgagaacttt
ctctatgttgtggagggaatgcaatttgaccgtggttacatctctccgtactttgtaaca
gacagtgagaaaatgactgcagagtacgagaactgcaagctgcttttggttgataagaaa
atcaccaacgcaagggatcttatcaacgttttggaagaagccatcagaggtgcataccca
atcctgataattgcagaggatattgagcaggaggctcttgctacccttgtcgtcaacaag
ctcagaggatcactgaagatcgctgccatcaaagcccctggttttggagagcgcaagact
cagtacttggatgatattgccatccttactggagcaactgtaatcagagatgaagttggg
ctgtcacttgacaaggccgacaaatcagttcttggaacagctgcaaaggttgtccttacg
aaagagtcgacaacaattgttggtgatggcagcacccaggaagaagttactaagagggtt
gcacagattaaaaatctcattgaggcagcagaacaagaatatgaaaaggaaaagctcaat
gagaggatagcgaagcttgctggcggtgttgctgtcattcaggtgggagcacaaacagaa
actgaactaaaagagaagaagttgagagttgaggatgccctaaatgcaactaaggctgcc
gttgaggaaggtattgttgttggtggagggtgcactcttttgcggcttgcagctaaagtc
gacgccatcaaggatacactggagaacgacgagcagaaggttggagctgaaatagtaagg
agggccctgagctacccacttaaattgattgctaaaaacgccggtgtcaatggcagtgtt
gtcactgagaaggtcctttctaatgataacttcaagtatggttacaatgctgctactgga
cagtacgaggacctgatggctgctggtatcattgaccccaccaaggtggtgagatgctgc
ttggagcacgccgcgtcggtggccaagaccttcctgacatcagatgttgtggtcgtcgat
atcaaggagccggaggctgcacctgtcgcaaacccgatggacaactctggctatggatac
tga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (14)   
   RefSeq(nuc) (4)   
   GenBank (5)   
   EMBL (5)   
Protein domain (1)   
   Pfam (1)   
All databases (33)   

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