KEGG   Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_1166
Entry
Zymop_1166        CDS       T01556                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
zmp  Zymomonas mobilis subsp. pomaceae ATCC 29192
Pathway
zmp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zmp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Zymop_1166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zmp03021]
    Zymop_1166
   03019 Messenger RNA biogenesis [BR:zmp03019]
    Zymop_1166
Transcription machinery [BR:zmp03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Zymop_1166
Messenger RNA biogenesis [BR:zmp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Zymop_1166
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB ATPase_2 Spore_III_AA NACHT AAA_22 AAA_25 AAA_14 AAA
Other DBs
NCBI-ProteinID: AEI38061
UniProt: F8ETW4
Position
1361970..1363226
AA seq 418 aa
MHLKDLKQKSPSELVKMAEELGIEGASTLRKQDLLFAILKVQAEMGDQIMGLGTIEVLPD
GFGFLRSPEANYLAGPDDIYVSPNQVRKFGLRTGDTVEGEIRGPKDSERYFALTKLISVN
FDNPDNVRHRVNFDNLTPLYPSERLNLDTNDPTNKDKSARVIDIVAPQGKGQRSLIVAPP
RVGKTVLLQNIARAISENHPEVFLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAQRHV
QVAEMVIEKAKRLVEHKKDVVILLDSVTRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEVVLDRKVADKRIFPAMDV
GKSGTRKEELLVDKSTLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFASMNH
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgcatttaaaagatctcaaacaaaaatcaccttccgaactcgtcaaaatggcagaagaa
ctcggtatcgaaggcgcttccaccttacgtaagcaagaccttctttttgctattcttaaa
gtccaggccgagatgggtgaccaaattatggggcttggaacgatcgaagtcctccctgat
ggttttggtttcttacgtagcccagaagcgaactatctggctggtcctgatgacatctat
gtttctccaaatcaggtgcgtaaatttggtctcagaaccggcgatacggtagaaggtgaa
attcggggaccaaaagacagtgaacgttattttgcgcttacaaagctgatctccgttaat
tttgataatccggacaatgtccgtcatcgtgttaatttcgacaatctgacgccgctttat
ccttccgaaagattaaatctcgacaccaacgatccaacgaacaaagataaatccgcgcgg
gttatcgacattgtcgctccgcaaggtaaaggtcagcgttccttgattgttgcgccgcct
cgggtgggtaaaacggtcttgttgcaaaatatcgcacgggctatttctgaaaatcatccc
gaagttttcttgatcgtacttctgattgatgaacgaccggaagaagtgacggatatgcag
cgctccgtcaaaggtgaggtgatttcttcgaccttcgatgaacctgcacagcggcatgtt
caggtcgccgaaatggtcattgagaaagccaaaagactggtcgaacataaaaaagatgtg
gtgatcctattggattccgtcacgcgtcttggccgtgcctacaatacggttgttccctct
tcgggcaaggtcttaaccggcggtgttgatgctaacgcgttacaacgtcccaaacgcttc
tttggtgcggcacgcaatatcgaagaagggggctctctctctattatcgcgactgcctta
atcgataccggtagccgtatggatgaggtgatctttgaagaattcaaaggcaccggcaac
tccgaagtcgtgttggatcgcaaggtcgccgacaagcgtattttcccggctatggatgta
ggtaaatccggcacccgtaaagaagaattattggtggataaaagcactctctcaaaaatg
tgggtattgcgccgtattctgatgcagatgggtaccgtcgatgcgatggaattcttactt
gataagatgaaagattcaaaaacgaacgaagatttcttcgcttcgatgaatcattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system