KEGG   Zootermopsis nevadensis (dampwood termite): 110832784
Entry
110832784         CDS       T05136                                 
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
zne  Zootermopsis nevadensis (dampwood termite)
Pathway
zne03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110832784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zne03019]
    110832784
Enzymes [BR:zne01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     110832784
Messenger RNA biogenesis [BR:zne03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110832784
  mRNA degradation factors
   3'-5' decay
    Pan complex
     110832784
SSDB
Motif
Pfam: UCH_1 PAN2_N RNase_T UCH zf-CCCH_2 Omega-toxin DNA_pol_A_exo1
Other DBs
NCBI-GeneID: 110832784
NCBI-ProteinID: XP_021925782
Position
Unknown
AA seq 1312 aa
MQTYTDYPRMGHYDPSVTTSAGEMLMYSDGSAHYPLEEDTYELPSEGFVPTSEHFAEGYT
NAEFQETHTILADGGDRFGVSAIAFDQQEELLWMGNQGGHVTSYYGQGLQKYTSFQVHAN
QEVRHIHTFEDGILALTQTALRCQIRRGIPVFTHSSDNMEEMQCQLQISRDTLLMGGHQD
KVIEFNLSQGQETNLLHVGKNGCAILRLHPRFICAGDPTGRIDLRDPSTLKVEHTLEAHS
GSLSDFDVHGNLLVTCGFSNRQGSLSVDRFLMVYDLRMMRAVTPIQVMLDPLLLRFMPSF
SSRLVTVSALGQMQLVDTVALSQPNLCLYQVNTAGSMCLALDVSSSCQCMAFGDGGGSIH
FYTSNPHRAMFNSFSRETEFADPVEPLPPISILDDVTPLSSVPLPYYQPGSMLLSDWPEQ
YLKKVYRRTPPIDPEILRTMKMQGTIGYAPNPMGHRRNQVAYKLQKHGGGHSQIKLFGND
SRTGKSGEEANFIAIPKRYRKIDVKYSKMGMNDFDFDQYNKTRFPGLEATLPNSYCNAML
QVLYYMSPVRSVLLSHLCHKEFCLACELGYLFHMLDISQGFPCQSSNFLRVFRTIPEASA
LGLILSDQNPESKKKANLIQLIQSWNRFILHQIHYEILETRKQKLLEQQRQNDLSQAADR
DYFVYKEKDFPSILGDIHTRLVPKASVDSLAIHDADENISKITRVFPRILSDIHSHLVSK
TLSANGHSSNAYGEEDGKYARISAAAEGKKRMEGKTSSRREAEDEETEISRLFGMKKIHV
HRCLKCGHEISKESIVLLCNLIYPDITSGKVEFSFCDVLLQSLCPEQTTPAWCDSCDKYQ
PTLQTRQLKVLPNILTMNCGLDNQQNKCFWQTQMDQVVQKVLNQTGIQGVSGPSGRPCRY
GSNCSRPGCRFKHPGKTGENYTANTGLLYNTHSWLPMHIRIELLRKGGVNIRKIPPVDNE
PPENVVMSEDVTQAISYDLAAIVCYIDYPHQHEGKNLVALINVGPSYHCRAMGSPVSQWY
IFNDFSISPVPAQEVIWFSLDWKIPCALYWVNRDMPKNMIPPAHNPITIDVFLEDRCLAL
NNGARKMITFTPLAADEMPGQGDIVAMDAEFVTLNQEEAELHSDGKLSTIKPSHMSVARI
TCIRGYGPLEGTPFIDDYISTQEQVVDYLTQFSGIKPGDLDANFSSKHLTTLKATYQKLR
FLVDNGVKFVGHGLKNDFRVINLVVPADQVIDTVLLFHLPHHRMVSLRFLAWHFLGLKIQ
SVTHDSIEDARTALQLYQRYQQVEAEGSVTATMKELYEAGKQLQWKVPGVDT
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgcaaacgtacacggattatccaagaatgggtcattatgatccatccgtgactacttca
gcaggtgaaatgttaatgtacagtgatggcagtgcacattatcctttggaagaagatact
tatgaattaccgagcgaagggtttgttcctacaagtgagcattttgctgagggttataca
aatgcagagttccaagaaacacacactattcttgcagatgggggggatcgttttggagtg
tcagcaattgcatttgatcagcaagaagaattactatggatgggtaatcagggtggtcat
gtcacatcttactatggacaaggcctccagaaatacacttctttccaagtgcatgcaaat
caagaggtccgacatatccacacatttgaagatgggatcttagctttgacacaaactgcc
cttcgatgtcaaattcgaagaggaataccagtatttacacatagttctgataacatggaa
gaaatgcagtgccagctacagatttctcgagatacattactgatgggtgggcatcaagat
aaagtaatcgagtttaatctcagtcagggtcaagaaacaaatctgttacatgtgggaaag
aatggctgtgcgatcctgcggctacatcctcgatttatatgtgctggagacccaactggt
aggatcgatcttcgtgatcctagcactttgaaagtggagcatacgttagaagcacactca
gggagtttatctgacttcgatgtacatggaaatctattggttacctgtggattttcaaat
agacaaggcagcttatcagtagatcgtttcctcatggtgtatgatctacgcatgatgcgt
gctgtgacaccaatccaagtgatgctggaccctctgctactaaggtttatgccatctttt
tcatctcgtctagtcactgtgtctgctcttggtcaaatgcagcttgttgacactgttgct
ctttcacagccaaatctgtgtttatatcaggtcaacacagctggctctatgtgtttggca
ctcgatgtgtcatcgtcctgccaatgtatggcttttggtgatggtggaggttctatccat
ttctatacatccaatccacatagagccatgttcaatagcttttctcgggagactgagttt
gctgatccagttgaacctctaccaccaattagtattctggatgatgttacaccattatct
tcagttccattaccatattaccaaccagggagtatgttgctctctgattggccagagcag
tatttgaagaaagtatacagacggacaccgccaattgatccagagatactgagaaccatg
aaaatgcagggaacaattggctatgcaccaaaccccatgggccaccgaagaaatcaagtg
gcatataaattgcagaaacatggtggtggccatagccagataaagctatttggtaatgat
tcccgaacaggtaaatcaggagaagaggcaaatttcattgcaattccaaaacgctaccgt
aagattgatgttaagtattcaaagatgggcatgaacgactttgattttgaccagtacaac
aagactagattccctggtctcgaagcgactcttccaaactcctattgcaatgcaatgctt
caggtgctgtactacatgagccctgtccgaagtgttctgctgtcacatttatgtcacaag
gagttctgcctggcttgtgagcttggctatctgttccacatgctagatatttcacaagga
tttccttgccagtccagcaacttccttcgagtttttcgcaccatccctgaagcatcagca
ctgggtcttatactttcagaccaaaatcctgaaagcaaaaagaaagcaaacttaatccaa
ctcattcagagttggaatcgtttcatcctccatcaaattcattatgagatcctagaaaca
cgaaaacaaaaactgttggagcagcagcggcaaaatgatttatctcaagcagctgatcgc
gactactttgtatacaaggaaaaggattttcccagcatacttggtgatattcatacaaga
cttgtacccaaggccagtgttgacagtttagccatccatgatgcagatgagaacataagt
aagataacccgagtctttcccagaattttgagtgacattcattcacatcttgtgtccaaa
acactgtcagcaaatggtcatagttccaatgcttatggtgaagaggatggtaaatatgca
aggatatcagcagctgctgaaggtaagaaacgaatggaaggaaagaccagctccagaagg
gaagcagaagatgaagaaactgaaattagccgcctgtttgggatgaaaaaaattcatgtt
cacagatgtctgaaatgtggtcatgaaattagcaaagagtccatagttctactgtgcaat
ctcatatatccagacattacttcaggcaaggtggaatttagtttctgtgatgtgctacta
caaagtttgtgtccagaacagacaactccagcatggtgtgactcctgtgacaaatatcag
ccgaccttgcagactcgccaattaaaagttctaccaaacattcttacaatgaattgtggt
ctggacaatcagcagaataagtgtttctggcaaacacagatggaccaggttgttcagaaa
gtactaaaccagaccggcatccaaggcgtcagtggtccatctggtagaccgtgtcggtat
ggttccaactgttcaagaccaggttgccgatttaagcatcctggcaaaacaggagaaaat
tatactgcaaatacaggtcttctatataatacacattcttggcttcctatgcatattcga
atagagttgttaagaaagggaggagttaatattaggaagataccgccagtggataatgaa
ccaccagaaaatgtcgtcatgtcagaggatgtaacacaagctatcagttatgacttggct
gccattgtgtgctacattgattatcctcatcaacatgaagggaagaacttggtagcactt
attaatgtggggcccagctatcactgcagggcaatgggatcacccgtcagtcagtggtac
atctttaatgacttcagcatctcgccagttcctgcccaggaagtgatttggtttagtttg
gactggaagataccctgtgccctatactgggtgaatcgagacatgcccaagaatatgata
ccacctgctcataatcctatcacaatagatgtgtttctggaagacaggtgtttagcgctc
aataatggggccagaaaaatgatcacattcacacccctggcagcagatgaaatgcctggg
caaggtgacatagtagcaatggatgcagagtttgtaacattaaaccaagaagaagctgaa
cttcatagcgatggtaaattatcgactatcaagccatcacatatgtccgtagctcgtatc
acctgcatacgaggttatggtccactggaaggaacaccatttattgatgactatatctca
acacaggaacaagtagtggactacttgacacagttttcaggcatcaaaccaggagacttg
gatgccaacttcagctctaagcacctcaccacactgaaagccacataccagaaacttcgc
tttcttgttgacaacggggtcaaatttgttgggcatggacttaaaaatgacttcagagtg
atcaatttggtggttcctgcagaccaagtaatagacacagttcttcttttccatctgcca
caccaccgcatggtttccctccgctttctagcgtggcattttctaggattaaaaattcag
tcagtcactcacgattccattgaggacgctcggacagctcttcagttgtatcagcgttat
caacaggtagaagccgaaggcagtgtgactgccacgatgaaagaattgtatgaagctggt
aagcagttacaatggaaagtgccaggggttgatacttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (315)   
   KEGG ORTHOLOGY (1)   
   RefGene (311)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (332)   

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