KEGG   Zymoseptoria tritici: MYCGRDRAFT_32502
Entry
MYCGRDRAFT_32502  CDS       T02285                                 
Name
(RefSeq) hypothetical protein
  KO
K10754  replication factor C subunit 1
Organism
ztr  Zymoseptoria tritici
Pathway
ztr03030  DNA replication
ztr03410  Base excision repair
ztr03420  Nucleotide excision repair
ztr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ztr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MYCGRDRAFT_32502
   03410 Base excision repair
    MYCGRDRAFT_32502
   03420 Nucleotide excision repair
    MYCGRDRAFT_32502
   03430 Mismatch repair
    MYCGRDRAFT_32502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ztr03032]
    MYCGRDRAFT_32502
   03400 DNA repair and recombination proteins [BR:ztr03400]
    MYCGRDRAFT_32502
DNA replication proteins [BR:ztr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    MYCGRDRAFT_32502
DNA repair and recombination proteins [BR:ztr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     MYCGRDRAFT_32502
SSDB
Motif
Pfam: RFC1 BRCT AAA Rad17 AAA_22 AAA_16 AAA_33 nSTAND3 RuvB_N AAA_14 AAA_18 BRCT_2 PTCB-BRCT AAA_28
Other DBs
NCBI-GeneID: 13399171
NCBI-ProteinID: XP_003857232
JGI: Mycgr3_32502
UniProt: F9X078
Position
1:complement(3601275..3604610)
AA seq 1078 aa
MPPDIRSFFGGKPAGTAAPTPSKPDEPSKKRGRARKVVDDDEDEEDVPVAKKKSTPSKAK
AKQPDPVAEETTADDFFGSGKPKRSEAMRPKTRERAGTGGSVKEETPKKKAAAKGKAAKA
TPNGRSSTRVKKESNYAELDSNDFPDDDMEDAAEDVFKAGAATRRRLGDDYEEASDDDDA
VIVPRKNGSGRQKKKKDEDEDGFDPDRDTDMKDDVLEHQPTKKTSSKSINKRKSAAMHDE
DDLDLEVEEAKPAKKRASPAKKAPAAKKQKKAEVEDSAELKAIFASIPTIDAPPPPPKDD
DDGEGKKKFQFGQHANSAVPAGAIDPTDLPSGQDNCLAGLTFVFTGQLSRLGREQGQNLV
KQYGGKVTTAPSKKTSYVVLGEDAGPKKLETIKNYNLKVINEDGLFALIQKLPANGGDSA
AAEKQAEKIAKEEEKVREAAAEMDRQEKAQRAAQAAQAAKAAKASSSVTQSAPQKAKAPV
NPDAPDSRLWTVRYAPQSLNQICGNKTQVEKIQTWLRMFPKNQRTGFKMPGKDGSGTHRA
IMIHGPPGIGKTTAAHLVAKLEGYDIVESNASDTRSKKLVETGLKGVLSTTSLMGYFSRG
VDDVEASKKKLVLIMDEVDGMSAGDRGGVGALAAVCKKTQVPMILICNDRKLPKMKPFDF
VTYDVPFRRPTTDMIRSRITTIAYREGLKMPANVINALIEGSGADIRQVVNMISTAKLDE
QNLSYEDSKDMSKAWQKHIILKPWDMVGKILGGGLFNPAANSSLNDKTELYFNDHDFAPL
MLQENYLGSNPQRSNRFNSNPKMKRLAELDLVSKAAESISDGDLVDRMIHGSQQQWSLMP
AHAIFSFVRPASFVYGTLAGHQTRFTAWLGKNSNQGKLSRFIKEIQGHMRLRVSADRHEI
RQTYMPLLFEKLVKKLQTDGKDAVPEIIELMDSYFLTKEDWDAILELGVGDSDMEKIKIE
TQAKSTFTRLYNQQSHPLPFMKASQVVAPKKAPAQDKPDLEEAFEVSEDEAPDDADVKDE
DQELDLSKDKYVKQPKKKKASAKAGASKKKKGAKGDDDDGDEEEEKPKKGKGKGRAKK
NT seq 3237 nt   +upstreamnt  +downstreamnt
atgcctcccgacatccgctccttcttcgggggcaaacctgctggcaccgcagctcccact
ccctcgaagcctgacgaacccagcaagaagcgcggccgagcgaggaaggttgtggacgat
gacgaagacgaggaagacgtaccagtagccaagaagaagtctacaccctcaaaagccaaa
gcaaagcaaccagaccctgtggcggaggagacgactgcagacgatttcttcggctctggc
aagcccaaacgctctgaagcgatgcggccaaagacacgtgagagggccggtactggagga
agtgtcaaggaagagacgccaaagaagaaggctgcggcaaaaggcaaggccgcaaaagct
acaccgaatgggaggagctcaacacgtgtcaagaaggagtcgaactacgcagaactagac
tccaacgacttccccgatgatgacatggaggatgctgctgaggatgtgttcaaagccggt
gccgctactcgtcgacgtcttggcgatgactacgaggaggccagtgacgatgacgacgca
gtcatagtgcctaggaagaatggcagtggcaggcagaagaagaaaaaggatgaagacgaa
gatggtttcgacccagatcgtgacacggatatgaaagatgatgtcctggaacatcagcca
acgaagaagacatcgagcaagagtatcaacaagcgaaagtcagcggcaatgcatgacgag
gatgatctagatctcgaagtcgaagaggcaaagccggcgaagaagcgcgcatcgcctgcg
aagaaggcaccggctgcgaagaaacagaagaaagccgaggtcgaagacagtgccgagctg
aaggctatctttgccagcattcccacaatcgatgctccacctcccccgccgaaggacgat
gacgatggagagggcaagaaaaagtttcaattcggccaacacgcaaactcggccgtgcca
gcaggagcaattgacccgacggatctcccatctgggcaagacaactgcttggcgggcctt
acctttgtattcaccgggcaattgtcgcgcctcggaagagagcaaggccaaaatcttgtc
aagcagtacggtggcaaggtcaccaccgctccgtcgaagaagactagctacgttgtcctt
ggcgaggatgctggaccgaagaaactcgagacaatcaagaactacaacttgaaggtaatc
aacgaggatggcctctttgcgctgattcaaaaattacctgcgaatggcggagacagcgcg
gcggccgagaaacaggccgagaagattgcaaaggaagaagagaaggtgcgtgaggctgcc
gccgaaatggaccgtcaggagaaagctcaacgagctgcccaagctgcacaagcagccaag
gctgccaaagcatcttcgtctgtgacccagtccgcaccgcaaaaagccaaggctccagtg
aatccagatgctcccgactccaggctgtggacagtccgatacgcgcctcaatcgctcaac
caaatctgcggcaacaagactcaagttgagaagatccagacctggctgcgcatgttccca
aagaaccagaggacgggtttcaagatgcctggaaaggatgggagcggcactcacagagca
atcatgattcacggtcctcccggtattggtaaaactaccgctgctcatctggtggccaag
ctcgaaggatacgacatcgtggagtccaacgcatctgacacgcgttcgaagaaactggtg
gagacaggtctcaaaggcgtcctctccaccacctccttgatgggctatttctctcgtggt
gttgatgacgtggaggcttcgaagaagaagcttgtgctcatcatggatgaggtcgacggc
atgagtgcaggtgatcgtggcggtgtcggtgcactggctgctgtgtgcaagaagacacag
gttccgatgattctcatctgcaatgatcgcaaactgccaaagatgaagcccttcgacttc
gtcacatatgatgtgcctttccgccgtccaacgaccgacatgattcgcagtcgaatcact
accatcgcataccgcgaaggcctcaagatgccagcgaatgttatcaacgcgctgatcgag
ggttctggcgcggatatccgtcaggttgtcaacatgatcagcaccgccaaactcgacgag
cagaatctctcgtacgaggacagcaaggacatgagcaaagcctggcagaagcacatcatt
ctgaagccctgggacatggttggcaagatccttggcggtggactgttcaatcccgcggcc
aattcttcgctgaacgacaagacggagctttacttcaacgatcacgacttcgcgcctctt
atgttgcaggagaactaccttggttcgaatccacagcgctcgaaccgcttcaatagtaac
cccaagatgaagaggctggcagaattggacctcgtcagcaaggcagcggagtccatcagc
gacggtgacctcgtggatcgcatgattcacggcagtcagcagcaatggtctctgatgcca
gcgcatgctatcttcagttttgtccgtcccgcgagctttgtgtacggcaccctggctggc
catcaaacacgcttcaccgcgtggctgggtaagaactctaaccaaggaaagctctcgcgt
ttcatcaaggagattcaaggccacatgcgcctacgcgtttccgcggatcgtcacgagata
cgacagacatatatgccactcttgttcgagaagctcgtcaagaagcttcagacggacggc
aaagacgccgtgccggagatcatcgaattgatggattcatacttcttgacgaaggaggac
tgggatgctatcttggaactgggtgttggcgactccgacatggagaagatcaagatcgag
acgcaggccaaatcgacctttacccgattgtacaatcagcagtctcacccactgccgttc
atgaaggcttcgcaggtcgtggcaccgaagaaagcgcctgctcaggacaagcccgatttg
gaggaagcgtttgaagtatccgaggacgaggctcccgatgatgcagatgtcaaagatgaa
gatcaagagctcgatctcagcaaggacaagtacgtcaagcagccgaagaagaagaaggct
tctgccaaagccggcgcgagcaagaagaagaaaggtgccaaaggcgacgacgacgatgga
gatgaggaagaggagaaaccgaagaagggcaaaggaaaaggccgcgcaaagaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (64)   

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